Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL357552.1-201ENST00000445254 415 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC006499.5-201ENST00000505037 514 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 DUXAP2-201ENST00000519198 589 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC019176.2-201ENST00000611579 315 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC084757.4-201ENST00000616350 526 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC092628.2-201ENST00000622492 339 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC000367.1-201ENST00000452711 1766 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
RSPO3Q9BXY4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RSPO3Q9BXY4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.21□□□□□ -1.89
RSPO3Q9BXY4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.21□□□□□ -1.89
RSPO3Q9BXY4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 SNORA9-201ENST00000384215 133 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL590704.1-201ENST00000402856 794 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL589655.1-201ENST00000405398 482 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 UBE2V1P15-201ENST00000407776 448 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 RNU6-55P-201ENST00000411092 107 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 RNU2-72P-201ENST00000411175 163 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 RNU6-954P-201ENST00000411355 107 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL035423.1-201ENST00000420331 213 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL445528.1-201ENST00000426330 420 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 ATP5JP1-201ENST00000431631 322 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 MTCO1P52-201ENST00000433928 531 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 CACYBPP1-201ENST00000438592 684 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 PDSS1P2-201ENST00000449397 678 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL136097.1-201ENST00000456945 913 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 RPL23AP62-201ENST00000463396 453 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC022790.1-201ENST00000522872 204 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL139174.1-201ENST00000531489 886 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC020914.6-201ENST00000594327 272 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC040174.2-201ENST00000602701 465 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL592295.2-201ENST00000612578 206 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC007342.8-201ENST00000623278 678 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC119674.1-220ENST00000641502 1048 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
RSPO3Q9BXY4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL034374.1-201ENST00000406329 351 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 RPS7P13-201ENST00000413955 498 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 TRGV6-201ENST00000417928 299 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 NPM1P24-201ENST00000428039 894 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 USP9YP31-201ENST00000431405 881 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 RPL17P35-201ENST00000432217 549 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL392003.1-201ENST00000434394 243 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL138799.3-201ENST00000438968 350 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL157884.3-201ENST00000448273 1184 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 MTND5P8-201ENST00000449817 1083 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 TRBV8-2-201ENST00000475637 270 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC078785.3-201ENST00000476607 425 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 CDH12P2-201ENST00000504393 298 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms