Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC053481.4-201ENST00000583164 216 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC073348.1-201ENST00000623002 331 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 ZNF33CP-201ENST00000432492 2030 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RPL32P23-201ENST00000397237 405 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RN7SKP156-201ENST00000410308 342 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RN7SKP111-201ENST00000410349 271 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 OR4F13P-201ENST00000428478 931 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 HMGB3P11-201ENST00000440127 604 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RRM2P4-201ENST00000441721 562 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 SNORD105B-201ENST00000458770 79 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RN7SL132P-201ENST00000478131 296 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RN7SKP122-201ENST00000515923 296 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 RAB9BP1-201ENST00000519581 626 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AL109653.1-201ENST00000603091 248 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AC090912.3-201ENST00000609775 533 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 MIR6830-201ENST00000636015 70 ntBASIC3.02□□□□□ -1.93
CCDC58Q4VC31 AC093908.1-201ENST00000623125 8092 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 MIR372-201ENST00000362225 67 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 SNORA70E-201ENST00000384492 135 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 ATP5A1P2-201ENST00000412323 255 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC007899.1-201ENST00000412776 775 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 RPS15AP29-201ENST00000445539 400 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 OR7L1P-201ENST00000456181 380 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 RPL21P104-201ENST00000464143 478 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC104986.1-201ENST00000517978 436 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC087888.1-201ENST00000550884 1254 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 MIR4286-201ENST00000580651 93 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC020914.6-201ENST00000594327 272 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 MIR7851-201ENST00000610611 160 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC006338.2-201ENST00000616864 791 ntBASIC3.01□□□□□ -1.93
CCDC58Q4VC31 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
CCDC58Q4VC31 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC58Q4VC31 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3□□□□□ -1.93
CCDC58Q4VC31 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3□□□□□ -1.93
CCDC58Q4VC31 SNORD9-201ENST00000362566 104 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC58Q4VC31 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCDC58Q4VC31 PPIAP31-201ENST00000405422 495 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 RN7SKP58-201ENST00000411010 305 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 Z99755.1-201ENST00000414048 380 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 RPL7P10-201ENST00000417407 739 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AC012065.2-201ENST00000421295 375 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 YY1P1-201ENST00000427625 668 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3□□□□□ -1.93
CCDC58Q4VC31 Z99127.3-201ENST00000448158 395 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AL157884.3-201ENST00000448273 1184 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 CCRL1P1-201ENST00000449542 1053 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 TPT1P13-201ENST00000449760 499 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AC021205.1-201ENST00000468797 348 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AC068724.1-201ENST00000487100 792 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3□□□□□ -1.93
CCDC58Q4VC31 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3□□□□□ -1.93
CCDC58Q4VC31 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3□□□□□ -1.93
CCDC58Q4VC31 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3□□□□□ -1.93
CCDC58Q4VC31 AC147055.1-201ENST00000509261 750 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms