Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 H3F3BP1-201ENST00000440551 403 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 HMGB3P30-201ENST00000457863 606 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 SNORA58-201ENST00000505219 137 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 ATP5LP3-201ENST00000514223 304 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RNU6-120P-201ENST00000516077 103 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 IGKV2-19-201ENST00000518132 283 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC022616.4-201ENST00000522985 181 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC024614.2-201ENST00000577584 372 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 MIR4489-201ENST00000578869 62 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AP001823.1-201ENST00000604056 1003 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 SNORD58B-201ENST00000607313 66 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 SDR42E1P1-201ENST00000611327 477 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 MIR6798-201ENST00000612887 67 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC023509.5-201ENST00000617434 807 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC068769.1-201ENST00000474767 2426 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC116158.1-201ENST00000560231 2129 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 Y_RNA.26-201ENST00000362539 101 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 SNORD16-201ENST00000362803 99 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 Y_RNA.473-201ENST00000384333 102 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 RPS4XP9-201ENST00000405151 780 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 RNU6-1140P-201ENST00000410517 106 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 TUBB4BP6-201ENST00000437576 479 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AP1S2P1-201ENST00000457344 379 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 RNU7-27P-201ENST00000459281 62 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AL136038.1-201ENST00000497246 351 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 SUMO2P4-201ENST00000504193 276 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 RN7SKP219-201ENST00000516825 296 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 RNU6-714P-201ENST00000516963 103 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC107934.1-201ENST00000522215 217 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 HSBP1P1-201ENST00000555205 166 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC084783.1-201ENST00000565846 910 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC012433.1-201ENST00000588916 398 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTC1Q2NKJ3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 OR56A5-201ENST00000340110 738 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 SNORA21-201ENST00000362423 132 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RNU6-552P-201ENST00000362869 119 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 Y_RNA.167-201ENST00000363735 109 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 SNORA70H-201ENST00000383910 135 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 Y_RNA.404-201ENST00000383978 102 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 SNORA70J-201ENST00000384182 135 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 SNORA70.9-201ENST00000384370 135 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms