Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC007537.2-201ENST00000472093 511 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AC010627.1-201ENST00000503819 1294 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 AC008565.1-201ENST00000509046 885 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 RNU6-276P-201ENST00000516114 96 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 SNORA19.3-201ENST00000516165 130 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AP001207.2-201ENST00000519490 539 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 OR8R1P-201ENST00000543943 764 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 TRAV15-201ENST00000556680 249 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX1Q15475 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 AL163642.2-201ENST00000604722 1019 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AC090948.2-201ENST00000607363 564 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AC078899.5-201ENST00000612475 178 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 AC015908.5-201ENST00000623289 343 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX1Q15475 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX1Q15475 AC139713.2-210ENST00000641741 992 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AL732372.2-225ENST00000642124 456 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 RNF6P1-201ENST00000444889 1784 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SIX1Q15475 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX1Q15475 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX1Q15475 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX1Q15475 AC006042.3-201ENST00000454684 1469 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SIX1Q15475 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIX1Q15475 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SIX1Q15475 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX1Q15475 AL136116.1-201ENST00000403591 381 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 SNORA57.3-201ENST00000411095 141 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX1Q15475 AL139247.1-201ENST00000422768 325 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX1Q15475 OR8F1P-201ENST00000425243 930 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 IPMKP1-201ENST00000425988 855 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AL158073.1-201ENST00000426848 1104 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC006989.1-201ENST00000427212 131 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 OR4F13P-201ENST00000428478 931 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AL117339.2-201ENST00000430475 180 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 RPS24P8-201ENST00000431490 402 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AL357520.1-201ENST00000441557 453 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 DUXAP8-207ENST00000456786 622 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 METTL15P1-201ENST00000481421 1045 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 RN7SL323P-201ENST00000494712 295 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC005912.1-201ENST00000495392 255 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 NDUFB4P12-201ENST00000513465 390 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC091163.3-201ENST00000518269 1144 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.79□□□□□ -1.8
SIX1Q15475 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 AC092851.1-201ENST00000535964 478 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.79□□□□□ -1.8
SIX1Q15475 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIX1Q15475 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.79□□□□□ -1.8
SIX1Q15475 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX1Q15475 AC068714.1-201ENST00000559623 800 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX1Q15475 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 ZNF971P-201ENST00000562068 1249 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 MTND1P8-201ENST00000571424 950 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC087499.8-201ENST00000578406 226 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 MIR4509-3-201ENST00000578671 94 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 MIR4509-2-201ENST00000583920 94 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC093227.2-201ENST00000589357 285 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX1Q15475 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX1Q15475 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX1Q15475 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX1Q15475 RMST_8.1-201ENST00000610287 165 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 DUXAP10-204ENST00000612052 616 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 MIR4509-1-201ENST00000618224 94 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX1Q15475 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX1Q15475 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX1Q15475 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX1Q15475 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX1Q15475 FAM91A3P-201ENST00000456826 2544 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC100871.1-201ENST00000507871 1456 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC024560.2-201ENST00000507981 1497 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC010329.2-201ENST00000595195 2737 ntBASIC3.79□□□□□ -1.8
SIX1Q15475 AC096656.1-201ENST00000623826 1364 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX1Q15475 AC073055.1-201ENST00000456901 1621 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX1Q15475 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIX1Q15475 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 RNU6-236P-201ENST00000363886 106 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms