Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR369-201ENST00000362155 70 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 RNU5E-1-201ENST00000362477 120 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 Y_RNA.146-201ENST00000363549 102 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 Y_RNA.259-201ENST00000364619 101 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 HMGB1P17-201ENST00000403495 628 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC233981.1-201ENST00000423224 461 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX4Q06945 AL139148.1-201ENST00000427122 680 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC104837.2-201ENST00000427236 424 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 GTF2IP13-201ENST00000438487 386 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX4Q06945 RN7SL172P-201ENST00000460535 303 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 RPL23AP12-201ENST00000467573 473 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC090096.1-201ENST00000489168 390 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.86□□□□□ -1.47
SOX4Q06945 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX4Q06945 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.86□□□□□ -1.47
SOX4Q06945 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX4Q06945 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX4Q06945 PSMA2P1-201ENST00000526365 646 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.86□□□□□ -1.47
SOX4Q06945 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX4Q06945 RPL10P14-201ENST00000565265 298 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 MIR4742-201ENST00000581069 85 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX4Q06945 AC006006.1-201ENST00000603082 144 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AL138960.1-201ENST00000613838 513 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AL132822.1-201ENST00000617063 513 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 7SK.10-201ENST00000621414 298 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC021106.3-201ENST00000623925 531 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AL078596.1-201ENST00000624856 447 ntBASIC5.86□□□□□ -1.47
SOX4Q06945 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX4Q06945 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX4Q06945 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX4Q06945 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX4Q06945 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX4Q06945 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX4Q06945 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX4Q06945 OR5P1P-201ENST00000299512 925 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 RNU6-952P-201ENST00000391164 108 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 BTBD10P2-201ENST00000404779 676 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 SPTLC1P2-201ENST00000407089 121 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 RNU2-62P-201ENST00000410868 191 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX4Q06945 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX4Q06945 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX4Q06945 AC073069.1-201ENST00000428657 441 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 BRWD1P3-201ENST00000428816 390 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX4Q06945 Y_RNA.639-201ENST00000458981 102 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 SNORD125-201ENST00000459538 96 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 Y_RNA.631-201ENST00000459607 101 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 RPL21P71-201ENST00000465598 459 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX4Q06945 RPL7P39-201ENST00000481157 744 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 RN7SL447P-201ENST00000494711 245 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX4Q06945 AC021146.2-201ENST00000504736 556 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX4Q06945 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX4Q06945 RN7SKP67-201ENST00000515905 235 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX4Q06945 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX4Q06945 AL389895.1-201ENST00000554127 252 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX4Q06945 RNU6-84P-201ENST00000607737 102 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 BX664608.1-201ENST00000610519 487 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 AL713922.2-201ENST00000619384 716 ntBASIC5.85□□□□□ -1.47
SOX4Q06945 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX4Q06945 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX4Q06945 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX4Q06945 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SOX4Q06945 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX4Q06945 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
SOX4Q06945 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
SOX4Q06945 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SOX4Q06945 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX4Q06945 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX4Q06945 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SOX4Q06945 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
SOX4Q06945 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SOX4Q06945 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SOX4Q06945 AC232271.1-201ENST00000602455 2715 ntBASIC5.84□□□□□ -1.47
SOX4Q06945 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX4Q06945 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SOX4Q06945 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX4Q06945 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SOX4Q06945 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SOX4Q06945 AC066616.2-201ENST00000559334 1481 ntBASIC5.84□□□□□ -1.47
SOX4Q06945 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX4Q06945 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SOX4Q06945 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX4Q06945 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SOX4Q06945 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX4Q06945 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX4Q06945 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX4Q06945 RNU6-730P-201ENST00000383954 104 ntBASIC5.84□□□□□ -1.47
SOX4Q06945 RNU6-317P-201ENST00000384031 107 ntBASIC5.84□□□□□ -1.47
SOX4Q06945 RPL5P18-201ENST00000406671 891 ntBASIC5.84□□□□□ -1.47
SOX4Q06945 RNU2-9P-201ENST00000410194 145 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms