Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
RAE1P78406 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAE1P78406 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RAE1P78406 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAE1P78406 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RAE1P78406 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RAE1P78406 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 AL031985.3-201ENST00000565390 2449 ntBASIC4.41□□□□□ -1.7
RAE1P78406 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAE1P78406 RNU6-178P-201ENST00000384631 104 ntBASIC4.41□□□□□ -1.7
RAE1P78406 MIR195-201ENST00000385194 87 ntBASIC4.41□□□□□ -1.7
RAE1P78406 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 ATG4AP1-201ENST00000416893 538 ntBASIC4.41□□□□□ -1.7
RAE1P78406 UBTFL3-201ENST00000418934 1024 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC234779.1-201ENST00000425910 285 ntBASIC4.41□□□□□ -1.7
RAE1P78406 MTCO3P30-201ENST00000426425 670 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.41□□□□□ -1.7
RAE1P78406 AL353597.2-202ENST00000434901 373 ntBASIC4.41□□□□□ -1.7
RAE1P78406 UBE2V1P3-201ENST00000439651 417 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL831737.1-201ENST00000441288 271 ntBASIC4.41□□□□□ -1.7
RAE1P78406 COX6CP12-201ENST00000446748 202 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL592447.1-201ENST00000447592 540 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 MEMO1P3-201ENST00000459811 302 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 UBTFL6-201ENST00000477929 1024 ntBASIC4.41□□□□□ -1.7
RAE1P78406 DEFB109F-201ENST00000491870 277 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 AC008638.1-201ENST00000506035 866 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.41□□□□□ -1.7
RAE1P78406 FTH1P11-201ENST00000517577 551 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 ZNF705CP-201ENST00000530515 889 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC022880.1-201ENST00000534017 973 ntBASIC4.41□□□□□ -1.7
RAE1P78406 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 AC074029.1-201ENST00000552531 1044 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 MIR3667-201ENST00000581025 74 ntBASIC4.41□□□□□ -1.7
RAE1P78406 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.41□□□□□ -1.7
RAE1P78406 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.41□□□□□ -1.7
RAE1P78406 AC006272.2-201ENST00000594725 163 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.41□□□□□ -1.7
RAE1P78406 AL512782.1-201ENST00000603093 364 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC079089.3-201ENST00000603094 673 ntBASIC4.41□□□□□ -1.7
RAE1P78406 BNIP3P11-201ENST00000603878 563 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL136363.2-201ENST00000604173 851 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC115286.1-201ENST00000604298 434 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC107214.2-201ENST00000608204 634 ntBASIC4.41□□□□□ -1.7
RAE1P78406 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RAE1P78406 MIR6864-201ENST00000617935 70 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AC140113.4-201ENST00000622087 222 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL356121.2-201ENST00000624715 780 ntBASIC4.41□□□□□ -1.7
RAE1P78406 AL391684.1-202ENST00000641293 1636 ntBASIC4.41□□□□□ -1.7
RAE1P78406 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 AC104260.2-201ENST00000623551 3497 ntBASIC4.41□□□□□ -1.7
RAE1P78406 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RAE1P78406 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.41□□□□□ -1.7
RAE1P78406 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.4□□□□□ -1.7
RAE1P78406 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 AC093591.2-201ENST00000565254 3843 ntBASIC4.4□□□□□ -1.7
RAE1P78406 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RAE1P78406 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RAE1P78406 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms