Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCNA1P78396 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCNA1P78396 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNA1P78396 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.13□□□□□ -1.75
CCNA1P78396 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCNA1P78396 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNA1P78396 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AL691447.1-201ENST00000419456 387 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 OR1AA1P-201ENST00000419597 916 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AC093698.1-201ENST00000423843 571 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNA1P78396 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNA1P78396 AC005326.1-201ENST00000429197 123 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNA1P78396 ATP5JP1-201ENST00000431631 322 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 TPTE2P3-201ENST00000441562 1189 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNA1P78396 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNA1P78396 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNA1P78396 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.13□□□□□ -1.75
CCNA1P78396 AP001086.1-201ENST00000494882 321 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNA1P78396 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNA1P78396 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCNA1P78396 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCNA1P78396 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.13□□□□□ -1.75
CCNA1P78396 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNA1P78396 AL121594.4-201ENST00000556211 1196 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AP000919.1-202ENST00000581139 1264 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 OR1AB1P-201ENST00000585564 761 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CCNA1P78396 AC012531.5-201ENST00000611375 151 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AC121761.2-201ENST00000617300 689 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AC074276.2-201ENST00000619891 348 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AP003355.3-201ENST00000623465 114 ntBASIC4.13□□□□□ -1.75
CCNA1P78396 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCNA1P78396 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNA1P78396 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNA1P78396 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNA1P78396 MTND5P3-201ENST00000438536 1800 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCNA1P78396 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNA1P78396 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNA1P78396 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCNA1P78396 SNORD6-201ENST00000365444 73 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNA1P78396 RNU4-74P-201ENST00000411280 161 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNA1P78396 HMGB3P20-201ENST00000417997 600 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNA1P78396 RPF2P1-201ENST00000424137 906 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNA1P78396 AC087650.1-201ENST00000431445 468 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 MTCO1P57-201ENST00000432182 261 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AL591503.2-201ENST00000442314 1005 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 ARL5AP2-201ENST00000444698 533 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AC090071.1-201ENST00000507713 644 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNA1P78396 AC108157.1-201ENST00000510511 539 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 RNU2-58P-201ENST00000516403 183 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNA1P78396 OR6C73P-201ENST00000546432 358 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.12□□□□□ -1.75
CCNA1P78396 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.12□□□□□ -1.75
CCNA1P78396 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNA1P78396 AC068790.5-201ENST00000602741 355 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AC079880.2-201ENST00000603790 1213 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AC006946.3-201ENST00000609791 756 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 AL732618.1-201ENST00000623251 301 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 MIR4496-201ENST00000635896 61 ntBASIC4.12□□□□□ -1.75
CCNA1P78396 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNA1P78396 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNA1P78396 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNA1P78396 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCNA1P78396 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCNA1P78396 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCNA1P78396 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.11□□□□□ -1.75
CCNA1P78396 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.11□□□□□ -1.75
CCNA1P78396 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCNA1P78396 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCNA1P78396 RNU4-35P-201ENST00000362588 141 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 DNAJC19P6-201ENST00000401853 280 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 AC096664.2-201ENST00000411843 406 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNA1P78396 AC011742.1-201ENST00000431448 434 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 BX119904.1-201ENST00000432026 348 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 AL138799.3-201ENST00000438968 350 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 AL645931.1-201ENST00000439737 410 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNA1P78396 RPL29P29-201ENST00000448725 423 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 RPL26P28-201ENST00000451325 435 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 HMGN2P7-201ENST00000456186 273 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 RPL9P32-201ENST00000464118 620 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNA1P78396 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.11□□□□□ -1.75
CCNA1P78396 SNORA70.14-201ENST00000516205 110 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms