Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
TPM4P67936 AC008264.2-201ENST00000610193 3731 ntBASIC3.72□□□□□ -1.81
TPM4P67936 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TPM4P67936 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TPM4P67936 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TPM4P67936 AL645937.1-201ENST00000641739 1652 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AL157700.1-201ENST00000561973 1432 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AC007066.1-201ENST00000392902 381 ntBASIC3.72□□□□□ -1.81
TPM4P67936 TCEA1P4-201ENST00000415066 844 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TPM4P67936 RPS27AP12-201ENST00000429552 465 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AC016712.1-201ENST00000431088 378 ntBASIC3.72□□□□□ -1.81
TPM4P67936 RPL23AP69-201ENST00000431134 458 ntBASIC3.72□□□□□ -1.81
TPM4P67936 MTCO1P45-201ENST00000431457 267 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AC023347.2-201ENST00000433994 462 ntBASIC3.72□□□□□ -1.81
TPM4P67936 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.72□□□□□ -1.81
TPM4P67936 U3.44-201ENST00000458938 192 ntBASIC3.72□□□□□ -1.81
TPM4P67936 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM4P67936 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM4P67936 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM4P67936 AC090071.1-201ENST00000507713 644 ntBASIC3.72□□□□□ -1.81
TPM4P67936 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TPM4P67936 POU5F1P7-201ENST00000508759 541 ntBASIC3.72□□□□□ -1.81
TPM4P67936 APOOP4-201ENST00000513530 597 ntBASIC3.72□□□□□ -1.81
TPM4P67936 IGHV3-76-201ENST00000522465 295 ntBASIC3.72□□□□□ -1.81
TPM4P67936 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM4P67936 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TPM4P67936 MTND4LP24-201ENST00000572277 291 ntBASIC3.72□□□□□ -1.81
TPM4P67936 MIR4506-201ENST00000584693 77 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AC067852.3-201ENST00000589177 561 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AC020914.6-201ENST00000594327 272 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AC018754.1-201ENST00000607486 925 ntBASIC3.72□□□□□ -1.81
TPM4P67936 uc_338.1-201ENST00000612113 180 ntBASIC3.72□□□□□ -1.81
TPM4P67936 AL356321.1-201ENST00000621360 228 ntBASIC3.72□□□□□ -1.81
TPM4P67936 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.72□□□□□ -1.81
TPM4P67936 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.72□□□□□ -1.81
TPM4P67936 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.72□□□□□ -1.81
TPM4P67936 AC005183.1-201ENST00000603687 1979 ntBASIC3.72□□□□□ -1.81
TPM4P67936 CR383658.2-201ENST00000547576 1525 ntBASIC3.71□□□□□ -1.82
TPM4P67936 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
TPM4P67936 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TPM4P67936 GSTA12P-201ENST00000402398 508 ntBASIC3.71□□□□□ -1.82
TPM4P67936 HMGB1P13-201ENST00000406019 642 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 RPL7P2-201ENST00000427639 268 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM4P67936 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM4P67936 MTCYBP12-201ENST00000440559 1134 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 AC146507.1-201ENST00000468335 354 ntBASIC3.71□□□□□ -1.82
TPM4P67936 ST13P14-201ENST00000474095 734 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 AC026979.1-201ENST00000492525 396 ntBASIC3.71□□□□□ -1.82
TPM4P67936 OR5H3P-201ENST00000502817 919 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC021146.7-201ENST00000509604 775 ntBASIC3.71□□□□□ -1.82
TPM4P67936 FCF1P8-201ENST00000510322 597 ntBASIC3.71□□□□□ -1.82
TPM4P67936 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.71□□□□□ -1.82
TPM4P67936 RN7SKP18-201ENST00000516005 275 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC007991.1-201ENST00000522680 631 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM4P67936 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 OR8R1P-201ENST00000543943 764 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.71□□□□□ -1.82
TPM4P67936 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.71□□□□□ -1.82
TPM4P67936 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM4P67936 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM4P67936 HSPE1P5-201ENST00000561489 272 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC090525.3-201ENST00000605601 189 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC099676.1-201ENST00000608886 657 ntBASIC3.71□□□□□ -1.82
TPM4P67936 ZYXP1-201ENST00000617638 118 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC022079.2-201ENST00000619739 566 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC019080.5-201ENST00000624891 757 ntBASIC3.71□□□□□ -1.82
TPM4P67936 AC138915.3-201ENST00000562908 1389 ntBASIC3.71□□□□□ -1.82
TPM4P67936 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.71□□□□□ -1.82
TPM4P67936 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TPM4P67936 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.7□□□□□ -1.82
TPM4P67936 AC091152.2-201ENST00000591628 2569 ntBASIC3.7□□□□□ -1.82
TPM4P67936 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TPM4P67936 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TPM4P67936 RN7SKP111-201ENST00000410349 271 ntBASIC3.7□□□□□ -1.82
TPM4P67936 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM4P67936 OR2B8P-201ENST00000432841 938 ntBASIC3.7□□□□□ -1.82
TPM4P67936 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM4P67936 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 AC010265.1-201ENST00000513509 211 ntBASIC3.7□□□□□ -1.82
TPM4P67936 RNA5SP385-201ENST00000515947 110 ntBASIC3.7□□□□□ -1.82
TPM4P67936 RNU6-1004P-201ENST00000516584 111 ntBASIC3.7□□□□□ -1.82
TPM4P67936 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM4P67936 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.7□□□□□ -1.82
TPM4P67936 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.7□□□□□ -1.82
TPM4P67936 PARP1P2-201ENST00000556806 195 ntBASIC3.7□□□□□ -1.82
TPM4P67936 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.7□□□□□ -1.82
TPM4P67936 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms