Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC020898.1-201ENST00000474167 787 ntBASIC3.52□□□□□ -1.85
LIM2P55344 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 AC015724.1-201ENST00000478577 156 ntBASIC3.52□□□□□ -1.85
LIM2P55344 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.52□□□□□ -1.85
LIM2P55344 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.52□□□□□ -1.85
LIM2P55344 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 DEFB109D-201ENST00000529497 240 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 AC087894.1-201ENST00000538359 518 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.52□□□□□ -1.85
LIM2P55344 SERPINE4P-201ENST00000554978 281 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AL121576.1-201ENST00000556055 276 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.52□□□□□ -1.85
LIM2P55344 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 AC093227.2-201ENST00000589357 285 ntBASIC3.52□□□□□ -1.85
LIM2P55344 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.52□□□□□ -1.85
LIM2P55344 AL163642.2-201ENST00000604722 1019 ntBASIC3.52□□□□□ -1.85
LIM2P55344 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 AC005156.1-201ENST00000613371 573 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AL138960.2-201ENST00000625145 535 ntBASIC3.52□□□□□ -1.85
LIM2P55344 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.52□□□□□ -1.85
LIM2P55344 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LIM2P55344 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIM2P55344 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIM2P55344 AC025263.3-201ENST00000622965 1396 ntBASIC3.51□□□□□ -1.85
LIM2P55344 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LIM2P55344 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LIM2P55344 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.51□□□□□ -1.85
LIM2P55344 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 U8.11-201ENST00000384699 133 ntBASIC3.51□□□□□ -1.85
LIM2P55344 U8.12-201ENST00000384701 133 ntBASIC3.51□□□□□ -1.85
LIM2P55344 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 AL590704.1-201ENST00000402856 794 ntBASIC3.51□□□□□ -1.85
LIM2P55344 PRRC2CP1-201ENST00000404428 159 ntBASIC3.51□□□□□ -1.85
LIM2P55344 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 CYCSP19-201ENST00000411715 316 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 AC013262.1-201ENST00000426710 252 ntBASIC3.51□□□□□ -1.85
LIM2P55344 RPL37P1-201ENST00000432310 284 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.51□□□□□ -1.85
LIM2P55344 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.51□□□□□ -1.85
LIM2P55344 UBE2V1P5-201ENST00000440070 405 ntBASIC3.51□□□□□ -1.85
LIM2P55344 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 OR51B8P-201ENST00000449892 769 ntBASIC3.51□□□□□ -1.85
LIM2P55344 MTCO3P16-201ENST00000454456 754 ntBASIC3.51□□□□□ -1.85
LIM2P55344 U8.18-201ENST00000459285 133 ntBASIC3.51□□□□□ -1.85
LIM2P55344 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.51□□□□□ -1.85
LIM2P55344 RPL21P71-201ENST00000465598 459 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC073522.1-201ENST00000483312 377 ntBASIC3.51□□□□□ -1.85
LIM2P55344 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 AC005351.1-201ENST00000511152 786 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 AC112206.4-201ENST00000515142 405 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC112198.4-201ENST00000515450 351 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.51□□□□□ -1.85
LIM2P55344 AC007991.1-201ENST00000522680 631 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 AP003102.1-201ENST00000525638 661 ntBASIC3.51□□□□□ -1.85
LIM2P55344 OR7E13P-201ENST00000526052 910 ntBASIC3.51□□□□□ -1.85
LIM2P55344 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.51□□□□□ -1.85
LIM2P55344 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.51□□□□□ -1.85
LIM2P55344 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 AC010735.1-201ENST00000567305 1026 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 AC104072.1-201ENST00000568817 668 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC023824.3-201ENST00000569003 562 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AL020997.2-201ENST00000602607 184 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC133794.1-201ENST00000602731 914 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC018645.2-201ENST00000609151 472 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC010872.1-201ENST00000624225 675 ntBASIC3.51□□□□□ -1.85
LIM2P55344 AC006927.2-201ENST00000639256 389 ntBASIC3.51□□□□□ -1.85
LIM2P55344 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LIM2P55344 AC090229.1-201ENST00000590983 1609 ntBASIC3.51□□□□□ -1.85
LIM2P55344 ZNF33CP-201ENST00000432492 2030 ntBASIC3.51□□□□□ -1.85
LIM2P55344 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LIM2P55344 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.51□□□□□ -1.85
LIM2P55344 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 AL136520.1-201ENST00000600311 1322 ntBASIC3.5□□□□□ -1.85
LIM2P55344 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms