Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC021087.2-201ENST00000504656 1203 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AC004069.2-201ENST00000505438 1114 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 AC021146.7-201ENST00000509604 775 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 ACTR6P1-201ENST00000514311 1104 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL12P48061 AC022080.3-201ENST00000544433 482 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 CR383656.14-201ENST00000551951 406 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL12P48061 AC018552.3-201ENST00000567416 561 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL12P48061 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL12P48061 MIR7106-201ENST00000612419 65 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 uc_338.32-201ENST00000615087 172 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL12P48061 LINC00216-201ENST00000623548 1126 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CXCL12P48061 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CXCL12P48061 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL12P48061 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL12P48061 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 AL356274.2-201ENST00000624379 3752 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL12P48061 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL12P48061 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CXCL12P48061 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.86
CXCL12P48061 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CXCL12P48061 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CXCL12P48061 AL031985.3-201ENST00000565390 2449 ntBASIC3.4□□□□□ -1.86
CXCL12P48061 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CXCL12P48061 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CXCL12P48061 RNU1-140P-201ENST00000365040 165 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 MIR513A2-201ENST00000385249 127 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 UBE2V1P2-201ENST00000397758 440 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 MTND4P22-201ENST00000413116 1169 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC017079.2-201ENST00000416102 485 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.4□□□□□ -1.87
CXCL12P48061 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL12P48061 AC004552.1-201ENST00000419089 348 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL12P48061 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL12P48061 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL12P48061 AL158071.1-201ENST00000430315 461 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 CACYBPP1-201ENST00000438592 684 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC092809.1-201ENST00000441469 474 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL12P48061 RPS26P3-201ENST00000470205 348 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC109925.1-201ENST00000478069 331 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL12P48061 AC090543.2-201ENST00000483963 348 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC004057.1-201ENST00000485827 348 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 RPL7P38-201ENST00000488396 739 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC006445.1-201ENST00000491925 405 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC080014.1-201ENST00000496877 1201 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.4□□□□□ -1.87
CXCL12P48061 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL12P48061 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL12P48061 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL12P48061 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL12P48061 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL12P48061 NPM1P35-201ENST00000533043 868 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 CBX3P5-201ENST00000552017 521 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL12P48061 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.4□□□□□ -1.87
CXCL12P48061 AL139395.1-201ENST00000603662 160 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL12P48061 AC009032.1-201ENST00000617574 431 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC074276.2-201ENST00000619891 348 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL12P48061 RPL23AP61-201ENST00000623642 466 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 AC127502.3-201ENST00000636170 1206 ntBASIC3.4□□□□□ -1.87
CXCL12P48061 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL12P48061 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL12P48061 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL12P48061 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL12P48061 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL12P48061 AC007342.7-201ENST00000624610 2337 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL12P48061 AC010329.2-201ENST00000595195 2737 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CXCL12P48061 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL12P48061 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CXCL12P48061 NACA3P-201ENST00000359690 648 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 SNORA62.2-201ENST00000364672 152 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.39□□□□□ -1.87
CXCL12P48061 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL12P48061 RNU6-146P-201ENST00000384602 108 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 RNA5SP104-201ENST00000410989 118 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC007899.1-201ENST00000412776 775 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL12P48061 AL160175.1-201ENST00000428124 247 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL12P48061 RPL7P28-201ENST00000437739 740 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL12P48061 AL627224.1-201ENST00000448334 444 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC140076.1-201ENST00000449897 361 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms