Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SGO1P2-201ENST00000429458 1589 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC139769.1-204ENST00000472297 1931 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC105074.1-201ENST00000623380 3095 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 RNA5SP305-201ENST00000362665 119 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 U8.4-201ENST00000363626 134 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 MIR765-201ENST00000390226 114 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 TAF9BP1-201ENST00000396646 746 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AL024474.1-201ENST00000404655 591 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX2-1P43699 RN7SKP267-201ENST00000410381 285 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 RNU4-34P-201ENST00000410431 124 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 RN7SKP213-201ENST00000410746 298 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 GJA6P-201ENST00000415117 1042 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC004074.1-201ENST00000421810 1063 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 RPS12P5-201ENST00000423449 371 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 RPS27AP12-201ENST00000429552 465 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-1P43699 KCTD10P1-201ENST00000434203 625 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 MTND3P1-201ENST00000441336 220 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 RSL24D1P3-201ENST00000449255 495 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AL133217.1-201ENST00000450980 425 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-1P43699 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 DDX39BP2-208ENST00000453923 258 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AL109741.2-201ENST00000455561 343 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-1P43699 RPL7P38-201ENST00000488396 739 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-1P43699 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 HNRNPKP5-201ENST00000515300 253 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 HIGD1AP3-201ENST00000515857 278 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 RN7SKP147-201ENST00000517154 244 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 IGLVIV-53-201ENST00000520107 367 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 MTCO1P47-201ENST00000523889 1271 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 SLC2A13P1-201ENST00000531560 322 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC135628.1-201ENST00000568867 534 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 ISCA1P3-201ENST00000577104 373 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX2-1P43699 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 VN1R92P-201ENST00000598511 928 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 AL139395.1-201ENST00000603662 160 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC106791.2-201ENST00000604680 391 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 OR6R2P-201ENST00000609216 300 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC116651.1-201ENST00000609724 556 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC008083.4-201ENST00000615076 444 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC090246.1-201ENST00000616499 426 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AL158196.1-201ENST00000616786 434 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 AC079248.2-201ENST00000623779 326 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC007546.2-201ENST00000623996 360 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-1P43699 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
NKX2-1P43699 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NKX2-1P43699 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-1P43699 AL359893.1-201ENST00000447628 1580 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 NOL8P1-201ENST00000508336 3529 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 MTND5P3-201ENST00000438536 1800 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX2-1P43699 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 RNA5SP307-201ENST00000362863 116 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 AL603766.1-201ENST00000407763 664 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.67□□□□□ -1.82
NKX2-1P43699 TIMM9P2-201ENST00000419324 266 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AC093162.1-201ENST00000419682 124 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.67□□□□□ -1.82
NKX2-1P43699 NANOGP6-201ENST00000429190 847 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 ELOCP18-201ENST00000434209 337 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 UBE2D3P1-201ENST00000436669 444 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 MTND5P2-201ENST00000442927 1142 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms