Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 NF1P3-201ENST00000457709 450 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RPL5P24-201ENST00000463742 885 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RPS17P11-201ENST00000474297 293 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RN7SL481P-201ENST00000477764 299 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC146944.2-203ENST00000502493 354 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC114322.1-201ENST00000506771 926 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AC139495.1-202ENST00000513164 354 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 SNORA19.3-201ENST00000516165 130 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AC026407.1-201ENST00000518369 204 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.11□□□□□ -1.75
HNF4AP41235 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.11□□□□□ -1.75
HNF4AP41235 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.11□□□□□ -1.75
HNF4AP41235 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.11□□□□□ -1.75
HNF4AP41235 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
HNF4AP41235 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.11□□□□□ -1.75
HNF4AP41235 AL390816.3-201ENST00000604527 1066 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AC112220.2-201ENST00000605513 533 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AC013468.1-201ENST00000608680 598 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HNF4AP41235 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HNF4AP41235 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
HNF4AP41235 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HNF4AP41235 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HNF4AP41235 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC097504.1-201ENST00000515103 2415 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HNF4AP41235 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.1□□□□□ -1.75
HNF4AP41235 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.1□□□□□ -1.75
HNF4AP41235 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
HNF4AP41235 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HNF4AP41235 RNU6-619P-201ENST00000365146 108 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 RNU6-549P-201ENST00000384433 107 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 MIR649-201ENST00000384843 97 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AL121978.1-201ENST00000402778 359 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AL138880.1-201ENST00000405824 642 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AC009237.2-201ENST00000421358 284 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AL592293.2-201ENST00000422292 996 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 RPL18P10-201ENST00000425606 538 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.1□□□□□ -1.75
HNF4AP41235 RPL23AP89-201ENST00000439324 255 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 FABP3P2-201ENST00000453169 399 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 RAD23BP3-201ENST00000454157 1152 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 CEACAMP4-201ENST00000457676 421 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 snoU13.3-201ENST00000459441 104 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 RNU7-140P-201ENST00000459546 60 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 RPS3AP6-201ENST00000484430 795 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC008427.1-201ENST00000503102 655 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HNF4AP41235 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC017037.1-201ENST00000508460 471 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC034205.1-201ENST00000520621 638 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 C1GALT1P3-201ENST00000522049 819 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
HNF4AP41235 TRAV8-5-201ENST00000537369 341 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.1□□□□□ -1.75
HNF4AP41235 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC005412.1-201ENST00000580812 1049 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 CLIC4P2-201ENST00000601934 717 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 ARF4P1-201ENST00000605447 541 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 RNU6-1192P-201ENST00000612197 107 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HNF4AP41235 FAM27D1-201ENST00000612308 341 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 CYCSP41-201ENST00000616920 296 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 RNU6-489P-201ENST00000618289 107 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.1□□□□□ -1.75
HNF4AP41235 AL445363.3-201ENST00000623080 671 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AC124312.6-202ENST00000623624 418 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.1□□□□□ -1.75
HNF4AP41235 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.1□□□□□ -1.75
HNF4AP41235 AC006927.2-201ENST00000639256 389 ntBASIC4.1□□□□□ -1.75
HNF4AP41235 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HNF4AP41235 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HNF4AP41235 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HNF4AP41235 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
HNF4AP41235 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms