Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD13P35453 AC090281.1-201ENST00000523019 276 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 AP001189.2-201ENST00000527320 189 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 OR4A45P-201ENST00000529954 901 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD13P35453 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXD13P35453 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD13P35453 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXD13P35453 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD13P35453 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD13P35453 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXD13P35453 OR4G1P-201ENST00000588632 938 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD13P35453 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD13P35453 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD13P35453 AC011458.1-201ENST00000604034 617 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 AL513477.2-201ENST00000607858 568 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 CYCSP41-201ENST00000616920 296 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 RMST_9.1-201ENST00000619945 193 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 AC006065.5-201ENST00000623427 349 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 AL773545.4-201ENST00000637262 310 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 MIR492-201ENST00000638676 116 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD13P35453 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXD13P35453 AL513478.4-201ENST00000641636 310 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD13P35453 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD13P35453 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXD13P35453 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXD13P35453 DCAF13P1-201ENST00000495256 1330 ntBASIC4.46□□□□□ -1.7
HOXD13P35453 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXD13P35453 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 RNU6-251P-201ENST00000363235 104 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 SNORD116-12-201ENST00000384468 92 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RNA5SP317-201ENST00000410176 116 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RNA5SP306-201ENST00000411087 107 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RNA5SP311-201ENST00000411290 116 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 HSPE1P12-201ENST00000412576 301 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 OR4K6P-201ENST00000416478 897 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 BOLA3P4-201ENST00000418151 400 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 MTCO3P1-205ENST00000422088 832 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXD13P35453 RSL24D1P6-201ENST00000426934 401 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 HIGD1AP12-201ENST00000427832 281 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 C4BPAP2-201ENST00000428434 478 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXD13P35453 AC005345.1-201ENST00000431868 217 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 ELOCP18-201ENST00000434209 337 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 GTF2IP7-202ENST00000436677 309 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 RPL23AP16-201ENST00000441715 421 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RPS11P1-201ENST00000451072 473 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 DUXAP8-207ENST00000456786 622 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 MTCO3P2-201ENST00000457365 171 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RPL7P19-201ENST00000469948 618 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 NDUFA5P9-201ENST00000472609 340 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXD13P35453 RPL31P61-201ENST00000496160 376 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 HIGD1AP3-201ENST00000515857 278 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RNA5SP315-201ENST00000516340 116 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 SNORA31.9-201ENST00000516429 84 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RNA5SP312-201ENST00000517068 116 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 RNU4-60P-201ENST00000517239 135 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXD13P35453 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXD13P35453 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 HIGD1AP5-201ENST00000529959 259 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 ZNF705CP-201ENST00000530515 889 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXD13P35453 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXD13P35453 AC022968.1-201ENST00000567372 442 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXD13P35453 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 AL390838.2-201ENST00000602394 274 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 AL139395.1-201ENST00000603662 160 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 AL591034.3-201ENST00000605511 685 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 DUXAP10-204ENST00000612052 616 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD13P35453 AL356121.2-201ENST00000624715 780 ntBASIC4.45□□□□□ -1.7
HOXD13P35453 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HOXD13P35453 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXD13P35453 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HOXD13P35453 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms