Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 MIR6864-201ENST00000617935 70 ntBASIC3.61□□□□□ -1.83
RORAP35398 AC090617.9-201ENST00000623751 147 ntBASIC3.61□□□□□ -1.83
RORAP35398 U6.98-201ENST00000637157 84 ntBASIC3.61□□□□□ -1.83
RORAP35398 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.61□□□□□ -1.83
RORAP35398 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 NCAPGP1-201ENST00000505112 1814 ntBASIC3.6□□□□□ -1.83
RORAP35398 AC024560.2-201ENST00000507981 1497 ntBASIC3.6□□□□□ -1.83
RORAP35398 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
RORAP35398 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RORAP35398 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.6□□□□□ -1.83
RORAP35398 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RORAP35398 RNA5SP119-201ENST00000362715 117 ntBASIC3.6□□□□□ -1.83
RORAP35398 RNU6-252P-201ENST00000363232 107 ntBASIC3.6□□□□□ -1.83
RORAP35398 PTMAP5-201ENST00000393073 333 ntBASIC3.6□□□□□ -1.83
RORAP35398 TAF9BP2-201ENST00000400856 499 ntBASIC3.6□□□□□ -1.83
RORAP35398 HSPE1P26-201ENST00000405341 275 ntBASIC3.6□□□□□ -1.83
RORAP35398 PSMA2P3-201ENST00000429685 675 ntBASIC3.6□□□□□ -1.83
RORAP35398 AC091286.1-201ENST00000431233 461 ntBASIC3.6□□□□□ -1.83
RORAP35398 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.6□□□□□ -1.83
RORAP35398 CYCSP43-201ENST00000438233 310 ntBASIC3.6□□□□□ -1.83
RORAP35398 UBDP1-202ENST00000457888 382 ntBASIC3.6□□□□□ -1.83
RORAP35398 AC108941.1-201ENST00000502853 530 ntBASIC3.6□□□□□ -1.83
RORAP35398 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.6□□□□□ -1.83
RORAP35398 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.6□□□□□ -1.83
RORAP35398 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.6□□□□□ -1.83
RORAP35398 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.6□□□□□ -1.83
RORAP35398 CCNG2P1-201ENST00000549521 1000 ntBASIC3.6□□□□□ -1.83
RORAP35398 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.6□□□□□ -1.83
RORAP35398 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.6□□□□□ -1.83
RORAP35398 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.6□□□□□ -1.83
RORAP35398 AC010928.3-201ENST00000587712 541 ntBASIC3.6□□□□□ -1.83
RORAP35398 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.6□□□□□ -1.83
RORAP35398 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RORAP35398 AC040174.2-201ENST00000602701 465 ntBASIC3.6□□□□□ -1.83
RORAP35398 AC135178.6-201ENST00000605314 398 ntBASIC3.6□□□□□ -1.83
RORAP35398 RNU1-30P-201ENST00000606575 163 ntBASIC3.6□□□□□ -1.83
RORAP35398 AL034408.1-202ENST00000636088 415 ntBASIC3.6□□□□□ -1.83
RORAP35398 ATE1-AS1-202ENST00000636460 506 ntBASIC3.6□□□□□ -1.83
RORAP35398 MTND4P21-201ENST00000453886 1357 ntBASIC3.6□□□□□ -1.83
RORAP35398 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RORAP35398 AL157700.1-201ENST00000561973 1432 ntBASIC3.6□□□□□ -1.83
RORAP35398 AP001148.1-201ENST00000624124 2359 ntBASIC3.6□□□□□ -1.83
RORAP35398 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
RORAP35398 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RORAP35398 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
RORAP35398 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RORAP35398 OTUD4P1-201ENST00000237841 3067 ntBASIC3.59□□□□□ -1.83
RORAP35398 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.59□□□□□ -1.83
RORAP35398 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RORAP35398 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RORAP35398 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RORAP35398 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RORAP35398 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.59□□□□□ -1.83
RORAP35398 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RORAP35398 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RORAP35398 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RORAP35398 MIR142-201ENST00000384835 87 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC009237.5-201ENST00000414271 501 ntBASIC3.59□□□□□ -1.83
RORAP35398 XKRYP4-201ENST00000414395 483 ntBASIC3.59□□□□□ -1.83
RORAP35398 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.59□□□□□ -1.83
RORAP35398 CKS1BP5-201ENST00000434172 273 ntBASIC3.59□□□□□ -1.83
RORAP35398 RPL7P29-201ENST00000437151 728 ntBASIC3.59□□□□□ -1.83
RORAP35398 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RORAP35398 AC006994.1-201ENST00000438212 839 ntBASIC3.59□□□□□ -1.83
RORAP35398 BTBD7P2-201ENST00000441962 620 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC097499.1-201ENST00000444277 208 ntBASIC3.59□□□□□ -1.83
RORAP35398 XKRYP5-201ENST00000449659 483 ntBASIC3.59□□□□□ -1.83
RORAP35398 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.59□□□□□ -1.83
RORAP35398 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.59□□□□□ -1.83
RORAP35398 AC010342.1-201ENST00000514047 877 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC022695.1-201ENST00000522089 237 ntBASIC3.59□□□□□ -1.83
RORAP35398 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RORAP35398 MTND5P21-201ENST00000531961 522 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.59□□□□□ -1.83
RORAP35398 AC025260.1-201ENST00000548858 430 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.59□□□□□ -1.83
RORAP35398 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.59□□□□□ -1.83
RORAP35398 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.59□□□□□ -1.83
RORAP35398 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.59□□□□□ -1.83
RORAP35398 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
RORAP35398 AC022146.1-201ENST00000595307 847 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC024220.1-201ENST00000603675 484 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.59□□□□□ -1.83
RORAP35398 AC011374.2-201ENST00000607135 526 ntBASIC3.59□□□□□ -1.83
RORAP35398 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.59□□□□□ -1.83
RORAP35398 AL354696.1-201ENST00000614652 497 ntBASIC3.59□□□□□ -1.83
RORAP35398 AC020978.9-201ENST00000624380 1141 ntBASIC3.59□□□□□ -1.83
RORAP35398 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.59□□□□□ -1.83
RORAP35398 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RORAP35398 AC009093.8-201ENST00000641769 292 ntBASIC3.59□□□□□ -1.83
RORAP35398 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.59□□□□□ -1.84
RORAP35398 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
RORAP35398 AC022031.1-201ENST00000585985 2593 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RORAP35398 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms