Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 FTH1P24-201ENST00000503502 462 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.19□□□□□ -1.58
SMARCA1P28370 RNU6-678P-201ENST00000516832 109 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 RPL12P22-201ENST00000519073 490 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.19□□□□□ -1.58
SMARCA1P28370 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMARCA1P28370 AC023161.2-201ENST00000551218 780 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC024909.2-201ENST00000553035 286 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.19□□□□□ -1.58
SMARCA1P28370 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.19□□□□□ -1.58
SMARCA1P28370 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.19□□□□□ -1.58
SMARCA1P28370 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.19□□□□□ -1.58
SMARCA1P28370 AL031985.2-201ENST00000600955 480 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AL356218.2-201ENST00000605264 187 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 SNORD91B-202ENST00000608459 222 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC092653.1-201ENST00000608509 531 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC090425.2-201ENST00000608818 501 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC140113.4-201ENST00000622087 222 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 AC091905.2-201ENST00000623143 306 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SMARCA1P28370 AC007529.1-201ENST00000418574 2178 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.19□□□□□ -1.58
SMARCA1P28370 AC011477.1-204ENST00000623416 1325 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 ZNF833P-201ENST00000424938 1494 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 EOGT-210ENST00000615922 1931 ntBASIC5.19□□□□□ -1.58
SMARCA1P28370 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.19□□□□□ -1.58
SMARCA1P28370 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.19□□□□□ -1.58
SMARCA1P28370 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SMARCA1P28370 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.18□□□□□ -1.58
SMARCA1P28370 AL390237.1-201ENST00000404226 1415 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC016716.1-201ENST00000265882 708 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 SNORA4.1-201ENST00000364263 144 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 ATP5F1P4-201ENST00000397288 746 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.18□□□□□ -1.58
SMARCA1P28370 CEACAMP8-201ENST00000413902 580 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.18□□□□□ -1.58
SMARCA1P28370 NPM1P11-201ENST00000417106 855 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.18□□□□□ -1.58
SMARCA1P28370 AC244035.1-201ENST00000430042 390 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.18□□□□□ -1.58
SMARCA1P28370 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.18□□□□□ -1.58
SMARCA1P28370 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.18□□□□□ -1.58
SMARCA1P28370 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMARCA1P28370 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMARCA1P28370 MTCO3P16-201ENST00000454456 754 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 MTCO2P18-201ENST00000457151 658 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SMARCA1P28370 CEACAMP10-202ENST00000495431 496 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.18□□□□□ -1.58
SMARCA1P28370 AC025674.1-201ENST00000507074 324 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.18□□□□□ -1.58
SMARCA1P28370 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SMARCA1P28370 RPL7L1P13-201ENST00000511702 739 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC015795.1-201ENST00000513669 327 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 RNU6-1261P-201ENST00000517194 104 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 NDUFA5P2-201ENST00000519723 344 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 OR5AK1P-201ENST00000524837 922 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 HIGD1AP5-201ENST00000529959 259 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMARCA1P28370 AC068446.3-201ENST00000555285 382 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC084757.1-201ENST00000559987 490 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.18□□□□□ -1.58
SMARCA1P28370 AC012435.1-202ENST00000568772 240 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.18□□□□□ -1.58
SMARCA1P28370 AC008687.2-201ENST00000597865 520 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AF131215.7-201ENST00000602443 707 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC025165.5-201ENST00000602802 578 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC079587.1-201ENST00000603846 277 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AL353600.1-201ENST00000608148 251 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AL354760.1-201ENST00000608357 643 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 AC005962.2-201ENST00000611427 652 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 HULC.1-201ENST00000612720 240 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 PCMTD1P7-201ENST00000634506 357 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SMARCA1P28370 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMARCA1P28370 AC139769.1-204ENST00000472297 1931 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SMARCA1P28370 AC107982.1-201ENST00000507171 1300 ntBASIC5.18□□□□□ -1.58
SMARCA1P28370 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMARCA1P28370 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMARCA1P28370 DBF4P1-201ENST00000412976 1892 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SMARCA1P28370 NXPH1-205ENST00000602349 1953 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 RNA5SP307-201ENST00000362863 116 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 RNU1-130P-201ENST00000363930 160 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SMARCA1P28370 RPS24P12-201ENST00000402084 394 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 AL138880.1-201ENST00000405824 642 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 SNORA74C-2-201ENST00000411179 201 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 TMSB10P2-201ENST00000416049 131 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.17□□□□□ -1.58
SMARCA1P28370 AC092634.6-201ENST00000418558 192 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.17□□□□□ -1.58
SMARCA1P28370 RPS12P10-201ENST00000427031 377 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 DLGAP5P1-201ENST00000430307 464 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 RPL23AP25-201ENST00000430973 463 ntBASIC5.17□□□□□ -1.58
SMARCA1P28370 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms