Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD8P13378 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD8P13378 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HOXD8P13378 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD8P13378 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXD8P13378 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD8P13378 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
HOXD8P13378 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD8P13378 AC107021.2-201ENST00000567714 2095 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC073343.1-201ENST00000328239 651 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 RNA5SP507-201ENST00000363603 121 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 RNU6-744P-201ENST00000365557 107 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 RNU6-1316P-201ENST00000384242 108 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 SNORA16A-201ENST00000384342 137 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD8P13378 CHEK2P3-201ENST00000416118 248 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXD8P13378 UQCRBP1-201ENST00000421129 336 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC007283.2-201ENST00000424739 197 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 DUTP6-201ENST00000425573 462 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 GTF2IP13-201ENST00000438487 386 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXD8P13378 BX284632.1-201ENST00000478218 541 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD8P13378 AC027575.1-201ENST00000481064 460 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 ATP5LP5-201ENST00000483050 299 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD8P13378 BTF3P13-201ENST00000513224 490 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 RNU6-559P-201ENST00000516151 98 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD8P13378 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD8P13378 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXD8P13378 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD8P13378 HMGN2P6-201ENST00000551091 273 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 HSPE1P3-201ENST00000559254 309 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 NPM1P42-201ENST00000560329 862 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD8P13378 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HOXD8P13378 AC006270.2-201ENST00000578523 652 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 SNORD39.3-201ENST00000584451 71 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD8P13378 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 AC080078.3-201ENST00000605407 463 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC126915.2-201ENST00000610957 190 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC109583.2-201ENST00000617367 129 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 AC068870.2-201ENST00000620635 389 ntBASIC6.15□□□□□ -1.42
HOXD8P13378 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD8P13378 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD8P13378 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXD8P13378 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.15□□□□□ -1.43
HOXD8P13378 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
HOXD8P13378 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXD8P13378 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXD8P13378 AC007159.1-201ENST00000566529 4706 ntBASIC6.15□□□□□ -1.43
HOXD8P13378 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXD8P13378 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXD8P13378 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXD8P13378 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 AL049780.3-201ENST00000624612 1583 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
HOXD8P13378 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
HOXD8P13378 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD8P13378 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXD8P13378 RNA5SP326-201ENST00000363209 110 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RNU6-1097P-201ENST00000363586 107 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RNU1-85P-201ENST00000364127 164 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RNU6-639P-201ENST00000384074 107 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RNU6-1297P-201ENST00000384415 104 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 MIR765-201ENST00000390226 114 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXD8P13378 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 RPL11P3-201ENST00000395256 523 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 AL136116.1-201ENST00000403591 381 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD8P13378 RPS15AP12-201ENST00000419498 388 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 IPO7P1-201ENST00000442031 636 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD8P13378 H2AFZP6-201ENST00000444403 394 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RPL12P39-201ENST00000455456 496 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 AC007547.1-201ENST00000462177 490 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RPL31P50-201ENST00000471002 296 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD8P13378 RN7SL826P-201ENST00000479724 288 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXD8P13378 UBA52P3-201ENST00000491303 382 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 AC108471.1-201ENST00000513977 287 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RN7SKP256-201ENST00000517201 314 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD8P13378 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXD8P13378 SUB1P1-201ENST00000524415 382 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms