Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC090229.1-201ENST00000590983 1609 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTDNEP1O95476 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTDNEP1O95476 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTDNEP1O95476 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC073464.3-201ENST00000422564 712 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 ARL4AP4-201ENST00000434170 518 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTDNEP1O95476 RPS12P18-201ENST00000442381 270 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 RAD1P2-201ENST00000446414 663 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC106872.2-201ENST00000494303 480 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC010627.1-201ENST00000503819 1294 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 HSPD1P15-201ENST00000505573 1122 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 RNU6-347P-201ENST00000516658 105 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 RN7SKP289-201ENST00000517244 295 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 MIR4429-201ENST00000580105 73 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 VN1R84P-201ENST00000593697 235 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC011492.1-201ENST00000600023 315 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 PSMA6P4-201ENST00000603247 718 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC083899.3-201ENST00000603413 594 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 AC012213.4-201ENST00000606457 354 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 uc_338.25-201ENST00000613756 156 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 AL157817.1-201ENST00000614264 790 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDNEP1O95476 OR8B1P-202ENST00000641132 1178 ntBASIC3.71□□□□□ -1.82
CTDNEP1O95476 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTDNEP1O95476 AL139811.1-201ENST00000424779 2299 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CTDNEP1O95476 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC106871.1-201ENST00000568324 3102 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 RNU6-805P-201ENST00000365643 106 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 MIR1183-201ENST00000408856 89 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 RPS7P15-201ENST00000415804 584 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC005326.1-201ENST00000429197 123 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC105402.2-201ENST00000438503 358 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 HMGB3P8-201ENST00000449709 577 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 HMGN1P8-201ENST00000463578 288 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 FTH1P9-201ENST00000513251 355 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC108471.1-201ENST00000513977 287 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC091515.1-201ENST00000548110 679 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 AL049844.2-201ENST00000604280 628 ntBASIC3.7□□□□□ -1.82
CTDNEP1O95476 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTDNEP1O95476 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CTDNEP1O95476 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTDNEP1O95476 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTDNEP1O95476 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTDNEP1O95476 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTDNEP1O95476 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 MIR148B-201ENST00000362252 99 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 RNA5SP383-201ENST00000362934 120 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 U3.6-201ENST00000363622 211 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC083799.1-201ENST00000366451 910 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTDNEP1O95476 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTDNEP1O95476 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 BMS1P19-201ENST00000433925 393 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC125238.1-201ENST00000448842 249 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC021146.5-201ENST00000503544 545 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 RNA5SP217-201ENST00000515959 91 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC084373.1-201ENST00000603311 235 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 AL096803.3-201ENST00000609032 532 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 AC107308.1-201ENST00000615897 301 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.69□□□□□ -1.82
CTDNEP1O95476 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms