Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.44□□□□□ -1.7
SMAD6O43541 AC119674.1-212ENST00000641155 993 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 AC018529.3-201ENST00000624212 2254 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.44□□□□□ -1.7
SMAD6O43541 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.44□□□□□ -1.7
SMAD6O43541 AC134882.1-201ENST00000603738 1676 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 OR11H5P-202ENST00000641612 1325 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SMAD6O43541 SCN1A-220ENST00000641603 12506 ntBASIC4.44□□□□□ -1.7
SMAD6O43541 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMAD6O43541 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 AL158163.1-201ENST00000603915 1649 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 AL133412.1-201ENST00000380194 2992 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 RNA5SP307-201ENST00000362863 116 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 OR6C69P-201ENST00000394268 893 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 RNU4-74P-201ENST00000411280 161 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC004448.2-201ENST00000422360 586 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 RSL24D1P6-201ENST00000426934 401 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 ETF1P3-201ENST00000430422 1160 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 RPL23AP25-201ENST00000430973 463 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.43□□□□□ -1.7
SMAD6O43541 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 AL354941.1-201ENST00000438600 464 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC007327.1-201ENST00000447461 264 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 AL050341.1-201ENST00000447743 313 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 PSMC1P13-201ENST00000458195 985 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC113347.3-201ENST00000509113 148 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 RNU6-720P-201ENST00000516363 108 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 MTCO3P15-201ENST00000526563 574 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 CYCSP29-201ENST00000533731 318 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.43□□□□□ -1.7
SMAD6O43541 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC022884.3-201ENST00000579571 248 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 RPL7P50-201ENST00000600588 727 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 VN1R82P-201ENST00000601481 356 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC140479.6-201ENST00000633535 357 ntBASIC4.43□□□□□ -1.7
SMAD6O43541 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.43□□□□□ -1.7
SMAD6O43541 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SMAD6O43541 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMAD6O43541 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMAD6O43541 MTND5P24-201ENST00000438892 1767 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.42□□□□□ -1.7
SMAD6O43541 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SMAD6O43541 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
SMAD6O43541 Y_RNA.3-201ENST00000362331 103 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.42□□□□□ -1.7
SMAD6O43541 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 Y_RNA.465-201ENST00000384293 102 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 RNU6-1215P-201ENST00000384441 102 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 DNAJC19P6-201ENST00000401853 280 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AL049693.1-201ENST00000402760 611 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 RPL23AP48-201ENST00000406913 488 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AL603766.1-201ENST00000407763 664 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 GSTM3P2-201ENST00000412746 530 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.42□□□□□ -1.7
SMAD6O43541 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.42□□□□□ -1.7
SMAD6O43541 PPIAP13-201ENST00000434706 478 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 MTND4P25-201ENST00000441039 533 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC093899.1-201ENST00000457984 376 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms