Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 RNU6-348P-201ENST00000384386 107 ntBASIC4.75□□□□□ -1.65
PROM1O43490 RNU6-1122P-201ENST00000384449 107 ntBASIC4.75□□□□□ -1.65
PROM1O43490 SNORA66-201ENST00000384792 133 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC013442.1-201ENST00000397347 228 ntBASIC4.75□□□□□ -1.65
PROM1O43490 OR8G2P-201ENST00000412796 908 ntBASIC4.75□□□□□ -1.65
PROM1O43490 MTND1P21-201ENST00000412991 285 ntBASIC4.75□□□□□ -1.65
PROM1O43490 FAR2P2-201ENST00000413041 594 ntBASIC4.75□□□□□ -1.65
PROM1O43490 UBTFL3-201ENST00000418934 1024 ntBASIC4.75□□□□□ -1.65
PROM1O43490 RPL36AP10-201ENST00000421785 322 ntBASIC4.75□□□□□ -1.65
PROM1O43490 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 FAR2P4-202ENST00000425399 584 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.75□□□□□ -1.65
PROM1O43490 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PROM1O43490 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 RPL34P20-201ENST00000442771 351 ntBASIC4.75□□□□□ -1.65
PROM1O43490 IGHV5-78-201ENST00000450948 295 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC009220.1-201ENST00000451614 275 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.75□□□□□ -1.65
PROM1O43490 HMGB3P21-201ENST00000452483 547 ntBASIC4.75□□□□□ -1.65
PROM1O43490 NDUFA5P7-201ENST00000452914 242 ntBASIC4.75□□□□□ -1.65
PROM1O43490 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.75□□□□□ -1.65
PROM1O43490 AC006511.1-201ENST00000470614 315 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC006463.2-201ENST00000473326 348 ntBASIC4.75□□□□□ -1.65
PROM1O43490 UBTFL6-201ENST00000477929 1024 ntBASIC4.75□□□□□ -1.65
PROM1O43490 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.75□□□□□ -1.65
PROM1O43490 SNX5P1-201ENST00000505757 1041 ntBASIC4.75□□□□□ -1.65
PROM1O43490 COX6B1P5-201ENST00000509843 249 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC109464.2-201ENST00000510242 943 ntBASIC4.75□□□□□ -1.65
PROM1O43490 RN7SKP298-201ENST00000515950 94 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC105031.1-201ENST00000518550 476 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC012339.2-201ENST00000523996 453 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.75□□□□□ -1.65
PROM1O43490 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.75□□□□□ -1.65
PROM1O43490 AC092490.3-201ENST00000545370 572 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.75□□□□□ -1.65
PROM1O43490 NMNAT1P1-201ENST00000554095 876 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.75□□□□□ -1.65
PROM1O43490 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.75□□□□□ -1.65
PROM1O43490 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.75□□□□□ -1.65
PROM1O43490 AL606834.2-201ENST00000602954 668 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC005084.1-201ENST00000605160 304 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC007684.1-201ENST00000609671 477 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AL357080.1-201ENST00000617394 239 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AC234782.5-201ENST00000617723 324 ntBASIC4.75□□□□□ -1.65
PROM1O43490 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 ASNSP1-204ENST00000641977 1664 ntBASIC4.75□□□□□ -1.65
PROM1O43490 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.75□□□□□ -1.65
PROM1O43490 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PROM1O43490 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PROM1O43490 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PROM1O43490 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.74□□□□□ -1.65
PROM1O43490 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PROM1O43490 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PROM1O43490 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PROM1O43490 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PROM1O43490 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PROM1O43490 Y_RNA.248-201ENST00000364501 109 ntBASIC4.74□□□□□ -1.65
PROM1O43490 RNU6-1283P-201ENST00000365314 105 ntBASIC4.74□□□□□ -1.65
PROM1O43490 MIR141-201ENST00000384975 95 ntBASIC4.74□□□□□ -1.65
PROM1O43490 RAP1BP3-201ENST00000407180 549 ntBASIC4.74□□□□□ -1.65
PROM1O43490 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.74□□□□□ -1.65
PROM1O43490 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.74□□□□□ -1.65
PROM1O43490 AC013429.2-201ENST00000418798 781 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.74□□□□□ -1.65
PROM1O43490 NEK4P1-201ENST00000433383 879 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AL049745.1-201ENST00000433953 286 ntBASIC4.74□□□□□ -1.65
PROM1O43490 OR7E125P-201ENST00000443450 846 ntBASIC4.74□□□□□ -1.65
PROM1O43490 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.74□□□□□ -1.65
PROM1O43490 RPS27AP15-201ENST00000447672 466 ntBASIC4.74□□□□□ -1.65
PROM1O43490 TCEA1P1-201ENST00000449716 880 ntBASIC4.74□□□□□ -1.65
PROM1O43490 TMED11P-201ENST00000479478 690 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.74□□□□□ -1.65
PROM1O43490 AC073073.1-201ENST00000493920 463 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.74□□□□□ -1.65
PROM1O43490 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.74□□□□□ -1.65
PROM1O43490 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.74□□□□□ -1.65
PROM1O43490 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.74□□□□□ -1.65
PROM1O43490 SNORA48.10-201ENST00000516965 160 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.74□□□□□ -1.65
PROM1O43490 HIGD1AP6-201ENST00000521833 279 ntBASIC4.74□□□□□ -1.65
PROM1O43490 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.74□□□□□ -1.65
PROM1O43490 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.74□□□□□ -1.65
PROM1O43490 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.74□□□□□ -1.65
PROM1O43490 AC009063.1-201ENST00000563342 702 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC093519.1-201ENST00000566109 298 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.74□□□□□ -1.65
PROM1O43490 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.74□□□□□ -1.65
PROM1O43490 AC083760.1-201ENST00000589621 670 ntBASIC4.74□□□□□ -1.65
PROM1O43490 BNIP3P30-201ENST00000601184 574 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AL627230.1-201ENST00000613077 211 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AL591926.8-201ENST00000616876 211 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms