Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 AL161912.2-201ENST00000565707 3007 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 AC016716.1-201ENST00000265882 708 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 RNA5SP51-201ENST00000364750 119 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 RNU6-650P-201ENST00000365658 111 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 SNORA5A-201ENST00000384111 134 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 HSPE1P8-201ENST00000406997 288 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 SNORA11-201ENST00000408789 128 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN3O15551 AL357078.2-201ENST00000416486 427 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 AC093698.1-201ENST00000423843 571 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 AC093422.3-201ENST00000428506 305 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 PSMA2P3-201ENST00000429685 675 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 GOT2P5-201ENST00000433995 546 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 USP9YP7-201ENST00000436723 430 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN3O15551 RNFT1P2-201ENST00000443064 757 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN3O15551 BX276092.4-201ENST00000452056 248 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 USP9YP32-201ENST00000452432 430 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 AC126121.1-201ENST00000482313 553 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 RPL23AP73-201ENST00000492507 471 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN3O15551 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 MIR2114-201ENST00000516645 80 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN3O15551 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN3O15551 AC008011.1-201ENST00000545989 227 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN3O15551 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN3O15551 AL133457.1-201ENST00000564251 987 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN3O15551 MIR4496-201ENST00000635896 61 ntBASIC4.02□□□□□ -1.77
CLDN3O15551 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN3O15551 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
CLDN3O15551 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN3O15551 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLDN3O15551 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN3O15551 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CLDN3O15551 AL512646.1-201ENST00000269395 1077 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 RNU6-1339P-201ENST00000363574 91 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AL359837.1-201ENST00000381357 287 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 MIR200C-201ENST00000384980 68 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 ATP5F1P3-201ENST00000397213 657 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AC245054.1-201ENST00000420944 258 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 OR51AB1P-201ENST00000429046 620 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AC004865.1-201ENST00000442276 1003 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 RPS3AP46-201ENST00000448352 682 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AC233982.1-201ENST00000451247 436 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC091564.1-201ENST00000464563 479 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN3O15551 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN3O15551 AP002812.1-201ENST00000495378 474 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN3O15551 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.01□□□□□ -1.77
CLDN3O15551 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC092747.2-201ENST00000545069 983 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC099489.2-201ENST00000574976 260 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.01□□□□□ -1.77
CLDN3O15551 ZNF92P2-201ENST00000600543 1059 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AC091488.1-201ENST00000604239 660 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 RMST_10.1-201ENST00000616309 154 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 AL163051.2-201ENST00000618976 735 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN3O15551 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.01□□□□□ -1.77
CLDN3O15551 AC091948.2-201ENST00000636510 279 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN3O15551 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLDN3O15551 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLDN3O15551 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLDN3O15551 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN3O15551 MAPK10-372ENST00000641954 3413 ntBASIC4.01□□□□□ -1.77
CLDN3O15551 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN3O15551 MFSD8-236ENST00000641509 4050 ntBASIC4□□□□□ -1.77
CLDN3O15551 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN3O15551 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN3O15551 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN3O15551 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN3O15551 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CLDN3O15551 SNORA51.12-201ENST00000384448 134 ntBASIC4□□□□□ -1.77
CLDN3O15551 SNORA48.7-201ENST00000391302 135 ntBASIC4□□□□□ -1.77
CLDN3O15551 ATP5A1P2-201ENST00000412323 255 ntBASIC4□□□□□ -1.77
CLDN3O15551 AL158825.1-201ENST00000414735 521 ntBASIC4□□□□□ -1.77
CLDN3O15551 HMGB3P20-201ENST00000417997 600 ntBASIC4□□□□□ -1.77
CLDN3O15551 RPL21P109-201ENST00000422213 475 ntBASIC4□□□□□ -1.77
CLDN3O15551 VN1R42P-201ENST00000424651 344 ntBASIC4□□□□□ -1.77
CLDN3O15551 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4□□□□□ -1.77
CLDN3O15551 AC073508.1-201ENST00000428866 656 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms