Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL355596.1-201ENST00000565399 3996 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1AO00322 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
UPK1AO00322 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1AO00322 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 U3.15-201ENST00000365398 212 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
UPK1AO00322 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1AO00322 CRYBB2P1-203ENST00000415709 538 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1AO00322 AL160175.1-201ENST00000428124 247 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 ATP5JP1-201ENST00000431631 322 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 MTCO1P57-201ENST00000432182 261 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 MTCO1P52-201ENST00000433928 531 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 ISCA1P2-201ENST00000438679 421 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 RPS15AP29-201ENST00000445539 400 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 RPL34P26-201ENST00000445636 354 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1AO00322 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1AO00322 MTND2P8-201ENST00000450555 1025 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 CEACAMP4-201ENST00000457676 421 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1AO00322 AC108078.3-201ENST00000502633 489 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.23□□□□□ -1.89
UPK1AO00322 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1AO00322 AC093770.1-201ENST00000511559 571 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AC010285.3-201ENST00000511668 676 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 SCARNA20.6-201ENST00000517251 106 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1AO00322 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1AO00322 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1AO00322 AL020997.2-201ENST00000602607 184 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 ABI1P1-201ENST00000603375 1120 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AL109618.2-201ENST00000605527 211 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AC018816.2-201ENST00000621460 353 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AL034408.1-202ENST00000636088 415 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AL161912.2-201ENST00000565707 3007 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 SRP72P2-201ENST00000344851 1979 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AL353743.4-201ENST00000422653 1547 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 AC032011.1-201ENST00000611703 1549 ntBASIC3.23□□□□□ -1.89
UPK1AO00322 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1AO00322 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1AO00322 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 MIR134-201ENST00000385258 73 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 EI24P2-201ENST00000397776 1076 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 RSL24D1P1-201ENST00000404972 493 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 MTCO3P31-201ENST00000405526 789 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AL512504.1-201ENST00000415494 778 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 AC245291.1-201ENST00000419501 328 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 B3GNT2P1-201ENST00000434960 952 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 TPTE2P1-204ENST00000435256 593 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 HSPD1P21-201ENST00000436541 245 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 MED6P1-201ENST00000439659 713 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.22□□□□□ -1.89
UPK1AO00322 AC090543.1-201ENST00000492168 485 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AC114967.1-201ENST00000504890 259 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.22□□□□□ -1.89
UPK1AO00322 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1AO00322 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1AO00322 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1AO00322 MTND5P21-201ENST00000531961 522 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AC025260.1-201ENST00000548858 430 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AL389895.1-201ENST00000554127 252 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 OR4U1P-201ENST00000554958 912 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.22□□□□□ -1.89
UPK1AO00322 AC115085.1-201ENST00000588924 229 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 LINC00216-201ENST00000623548 1126 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 AC007342.9-201ENST00000623877 1385 ntBASIC3.22□□□□□ -1.89
UPK1AO00322 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1AO00322 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1AO00322 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
UPK1AO00322 AL645937.1-201ENST00000641739 1652 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms