Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC138907.8-201ENST00000623981 2256 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 THAP12P9-201ENST00000503971 2360 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 SNORA70-201ENST00000384436 135 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-1081P-201ENST00000384537 107 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 RPL23AP29-201ENST00000397284 453 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AL359634.1-202ENST00000404721 284 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC080125.1-201ENST00000414888 684 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 RBMY2KP-201ENST00000418221 992 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 RPL21P23-201ENST00000446654 460 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AL590664.1-201ENST00000448065 339 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC078785.3-201ENST00000476607 425 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC099521.1-201ENST00000482557 334 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 RPL38P4-201ENST00000502376 214 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC006499.3-201ENST00000506077 748 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 RPL7L1P13-201ENST00000511702 739 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 TTC39CP1-201ENST00000512513 755 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 MTND5P4-201ENST00000514978 288 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 SNORA48.10-201ENST00000516965 160 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AL049872.1-201ENST00000556323 322 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 GTF2IP8-201ENST00000560687 584 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC112187.2-201ENST00000604345 283 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 uc_338.11-201ENST00000619132 160 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC009161.2-201ENST00000624626 138 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AC235565.1-201ENST00000456962 1325 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 OR4G1P-203ENST00000641984 1631 ntBASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PDZRN3Q9UPQ7 AL355834.1-201ENST00000556602 3965 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC007342.7-201ENST00000624610 2337 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.60-201ENST00000362831 98 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.150-201ENST00000363562 102 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-266P-201ENST00000364225 107 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-740P-201ENST00000364734 105 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.350-201ENST00000365409 98 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.785-201ENST00000384290 109 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AL583835.1-201ENST00000399570 407 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 SNRPEP6-201ENST00000407465 277 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 DUTP6-201ENST00000425573 462 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AL662874.1-201ENST00000426065 230 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AL589872.1-201ENST00000426602 288 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 RPS12P17-201ENST00000438591 377 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 TMSB4XP3-201ENST00000445144 114 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 CALM1P2-201ENST00000452941 448 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC106872.2-201ENST00000494303 480 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 DYNLL1P6-201ENST00000503440 264 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.703-201ENST00000516846 111 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 SNORA43.3-201ENST00000517240 103 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC078899.1-201ENST00000521432 1185 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms