Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 BX276092.4-201ENST00000452056 248 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC015724.1-201ENST00000478577 156 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 RPS3AP6-201ENST00000484430 795 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC068305.1-201ENST00000497406 726 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 RNA5SP309-201ENST00000516670 106 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AP003049.1-201ENST00000529418 457 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 CYCSP30-201ENST00000546447 172 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC074029.1-201ENST00000552531 1044 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC098483.2-201ENST00000603158 454 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AC005776.1-201ENST00000603164 290 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AL121772.2-201ENST00000614331 297 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AL109659.3-201ENST00000624985 950 ntBASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPIPA1Q9UND3 AP002001.2-201ENST00000529025 1469 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 RNA5SP124-201ENST00000362739 110 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 BTBD10P2-201ENST00000404779 676 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC069157.1-201ENST00000421749 137 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC093698.1-201ENST00000423843 571 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 OR51AB1P-201ENST00000429046 620 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC006946.1-201ENST00000429106 328 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 PSMA2P3-201ENST00000429685 675 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC087650.1-201ENST00000431445 468 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC139783.2-201ENST00000504847 1145 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AF279873.1-201ENST00000523393 313 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC022968.1-201ENST00000567372 442 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 MIR4504-201ENST00000577413 92 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC008739.3-201ENST00000603262 127 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 YWHAQP7-201ENST00000603536 658 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 BNIP3P4-201ENST00000604946 565 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC121761.2-201ENST00000617300 689 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AL139089.1-201ENST00000620372 975 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 C2orf27A-204ENST00000623058 969 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC006065.5-201ENST00000623427 349 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC124312.6-202ENST00000623624 418 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC020978.9-201ENST00000624380 1141 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 AC012442.3-202ENST00000636742 206 ntBASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA1Q9UND3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 DSTNP4-201ENST00000399472 474 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 HMGB3P19-201ENST00000403971 560 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 RAB9AP3-201ENST00000412737 573 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 RPL7AP73-201ENST00000413490 353 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 Z97055.1-201ENST00000419730 712 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms