Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 Z82195.1-201ENST00000604558 398 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AC011374.2-201ENST00000607135 526 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AL353743.4-201ENST00000422653 1547 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AL356057.1-202ENST00000402263 756 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AL590290.1-201ENST00000405336 380 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 UBE2V1P15-201ENST00000407776 448 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 RPS3AP25-201ENST00000411660 793 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 XKRYP4-201ENST00000414395 483 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 LINC01347-201ENST00000417964 355 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 MTCO3P4-201ENST00000419236 787 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 ARL2BPP3-201ENST00000421226 480 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 XKRYP5-201ENST00000449659 483 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 MTND2P6-201ENST00000455337 1030 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC106707.2-201ENST00000484182 374 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC021146.1-201ENST00000511202 716 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC008802.1-201ENST00000519121 791 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 TMF1P1-201ENST00000576058 373 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 OR4H6P-202ENST00000603819 340 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 MTND4P31-201ENST00000425607 1343 ntBASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP2Q9UDT6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 RNA5SP119-201ENST00000362715 117 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 RNA5SP424-201ENST00000390988 115 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL159169.1-201ENST00000421119 127 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 MORF4L1P7-201ENST00000426038 703 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 YME1L1P1-201ENST00000429435 297 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL050321.1-201ENST00000432363 400 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 HSPD1P21-201ENST00000436541 245 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 RPL6P5-201ENST00000445678 828 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 RPL23AP23-201ENST00000452590 471 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 RPL9P32-201ENST00000464118 620 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC022034.3-201ENST00000471393 478 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 TRBV12-2-201ENST00000489763 344 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 OR5H4P-201ENST00000510851 923 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 RN7SKP83-201ENST00000516512 178 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC093014.1-201ENST00000548926 724 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 CCNG2P1-201ENST00000549521 1000 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL121576.1-201ENST00000556055 276 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 MTND4LP24-201ENST00000572277 291 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AP001180.3-201ENST00000582221 145 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 MIR3922-201ENST00000585192 84 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC115085.1-201ENST00000588924 229 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AP003117.1-201ENST00000602771 554 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC103710.3-201ENST00000608157 948 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC012531.5-201ENST00000611375 151 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AL109620.1-201ENST00000618738 1197 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 AC244100.1-202ENST00000621554 382 ntBASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLIP2Q9UDT6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms