Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 Z95114.1-201ENST00000624264 14574 ntBASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.72□□□□□ -1.49
BHLHE41Q9C0J9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
BHLHE41Q9C0J9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
BHLHE41Q9C0J9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
BHLHE41Q9C0J9 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.71□□□□□ -1.49
BHLHE41Q9C0J9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
BHLHE41Q9C0J9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC140479.2-201ENST00000421567 3130 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC005224.3-201ENST00000584683 2140 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 Y_RNA.414-201ENST00000384011 101 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-1226P-201ENST00000384317 107 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AL096829.1-201ENST00000413677 457 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 RPL35AP31-201ENST00000418340 337 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 RPL12P12-201ENST00000424633 501 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AL031736.2-201ENST00000426573 787 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 FTH1P1-201ENST00000437933 532 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC118758.1-202ENST00000454719 225 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 MTND5P22-201ENST00000458380 195 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 ACA64.4-201ENST00000459070 127 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AP001992.1-205ENST00000462248 379 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC104057.1-201ENST00000515547 497 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 Y_RNA.682-201ENST00000516457 100 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-273P-201ENST00000516937 96 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 HMGN2P47-201ENST00000559378 272 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 MIR4420-201ENST00000583944 77 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC006006.1-201ENST00000603082 144 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC245389.1-201ENST00000605141 529 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 RPSAP75-201ENST00000605848 301 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AL031666.3-201ENST00000609320 1006 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC096861.1-201ENST00000616652 240 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AL355480.1-201ENST00000629041 99 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC009313.2-201ENST00000417893 1941 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC020656.2-201ENST00000613291 5309 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AC011933.2-201ENST00000578539 2790 ntBASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BHLHE41Q9C0J9 AP000432.2-201ENST00000624164 2048 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 MTCO1P7-201ENST00000419523 1542 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AP002512.4-202ENST00000641599 4530 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 HSPE1P11-201ENST00000339579 310 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 OR10R3P-201ENST00000361688 942 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RN7SKP128-201ENST00000364270 303 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RN7SKP171-201ENST00000364417 303 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 U3.11-201ENST00000364476 212 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 Y_RNA.301-201ENST00000364990 103 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 SNORA22B-201ENST00000383876 138 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-1293P-201ENST00000384077 107 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-196P-201ENST00000384315 107 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-903P-201ENST00000391270 109 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AL356057.3-201ENST00000402607 340 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNA5SP198-201ENST00000410376 127 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNU2-39P-201ENST00000410604 198 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AL590399.2-201ENST00000427536 309 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 MED13P1-201ENST00000428342 171 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 MTATP6P16-201ENST00000434543 526 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 SUMO2P3-201ENST00000438311 288 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 KRT8P51-201ENST00000438938 274 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RPL12P11-201ENST00000439970 501 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms