Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNA5SP337-201ENST00000517007 109 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 OR5AQ1P-201ENST00000527596 927 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AP000857.1-201ENST00000532151 543 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 RPS3AP4-201ENST00000555161 764 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL049779.3-201ENST00000557141 606 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 SNORD84-203ENST00000584275 78 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC092954.2-201ENST00000609103 430 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC245517.5-201ENST00000611529 162 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL512624.1-201ENST00000613638 469 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 CYP4F35P-202ENST00000636121 390 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 RNU6-637P-201ENST00000384050 107 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 OR3A2-201ENST00000408891 1076 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 OR2AT2P-201ENST00000413438 905 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 OR1AA1P-201ENST00000419597 916 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL662874.1-201ENST00000426065 230 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 ELOCP14-201ENST00000428070 331 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 MTND1P2-201ENST00000430604 821 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 OR4K11P-201ENST00000431829 904 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 ELOCP7-201ENST00000439968 331 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL663074.2-201ENST00000440621 479 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC010655.1-201ENST00000449336 292 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 ACA64.4-201ENST00000459070 127 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC093278.1-201ENST00000494700 600 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 EIF3LP3-201ENST00000495197 822 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 RNU6-615P-201ENST00000516065 106 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL133271.1-201ENST00000538229 291 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL512310.1-201ENST00000548639 172 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL512360.1-201ENST00000555346 234 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC009117.1-201ENST00000563948 554 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 MIR3167-201ENST00000579623 85 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC006504.3-201ENST00000586818 523 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 uc_338.26-201ENST00000612659 160 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC006065.5-201ENST00000623427 349 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC139792.3-201ENST00000623525 224 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 AL138713.1-201ENST00000624026 2130 ntBASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRAIPQ9BWF2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 OR1S2-201ENST00000302592 978 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 RN7SKP160-201ENST00000363804 340 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 RNU6-282P-201ENST00000365357 103 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AL391361.1-201ENST00000405580 489 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 RNU4-34P-201ENST00000410431 124 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC007283.2-201ENST00000424739 197 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 HMGB3P24-201ENST00000433260 622 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AL512326.1-201ENST00000443050 721 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC005297.1-201ENST00000444765 862 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 RPL23AP20-201ENST00000447965 421 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 PFN1P6-201ENST00000476786 399 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC019235.1-201ENST00000503847 207 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms