Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RN7SKP82-201ENST00000516786 223 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 SLC2A13P1-201ENST00000531560 322 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC007954.1-201ENST00000554198 494 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC073091.2-201ENST00000603205 907 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC091946.2-201ENST00000606105 291 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC091965.5-201ENST00000624785 342 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC107081.3-201ENST00000612715 2034 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AL031577.2-201ENST00000404133 280 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AL078604.1-201ENST00000404609 466 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AL590103.1-201ENST00000434488 307 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 B3GNT2P1-201ENST00000434960 952 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 MTND2P19-201ENST00000449129 1012 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 MTCO3P11-201ENST00000455103 774 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 RPL7P1-201ENST00000468161 747 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 RPL7P9-201ENST00000468715 747 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 OR4G11P-201ENST00000492842 939 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC084824.1-201ENST00000550917 1005 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC209154.1-201ENST00000582156 337 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC135507.1-201ENST00000607214 561 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC116651.1-201ENST00000609724 556 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AL161616.1-201ENST00000611867 286 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AC011477.1-204ENST00000623416 1325 ntBASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5RAP3Q96JB5 AL390862.1-201ENST00000635467 1469 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 XPOTP1-201ENST00000443317 2398 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 CR381670.1-201ENST00000624291 1693 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6-1293P-201ENST00000384077 107 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 MIR708-201ENST00000390708 88 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 DSTNP4-201ENST00000399472 474 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 PIGPP2-201ENST00000411569 458 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 USP9YP33-201ENST00000412220 421 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 RPS15AP38-201ENST00000413110 372 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC012519.1-201ENST00000424588 610 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 RPL23AP25-201ENST00000430973 463 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 USP9YP35-201ENST00000435696 412 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC009961.3-201ENST00000449832 765 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC010326.1-201ENST00000462726 602 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 HMGB1P21-201ENST00000502313 581 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC090071.1-201ENST00000507713 644 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 MTND5P13-201ENST00000513046 1079 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 ARL2BPP5-201ENST00000523141 481 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC074051.3-201ENST00000570238 358 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms