Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC006517.1-201ENST00000480485 328 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC113347.3-201ENST00000509113 148 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC005921.1-201ENST00000510589 286 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AP000827.1-201ENST00000527814 258 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC092851.1-201ENST00000535964 478 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC006064.5-201ENST00000541782 248 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 PCNPP1-201ENST00000552501 511 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL389895.1-201ENST00000554127 252 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC007424.1-203ENST00000554613 687 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL390838.2-201ENST00000602394 274 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 FAM25E-202ENST00000608562 189 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL121652.1-201ENST00000608851 448 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL138478.1-201ENST00000612252 832 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 MKKS-204ENST00000639674 192 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC095050.2-201ENST00000510748 1458 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VPS33AQ96AX1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS33AQ96AX1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 SNORD113.2-201ENST00000364166 89 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 snoZ40.1-201ENST00000364540 72 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 RNU6-335P-201ENST00000364563 113 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 SNORA51.6-201ENST00000384151 125 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 Y_RNA.493-201ENST00000384422 102 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 MIR506-201ENST00000384998 124 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 RPL31P1-201ENST00000398116 372 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AL583835.1-201ENST00000399570 407 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 VN1R54P-201ENST00000435210 1049 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC010326.1-201ENST00000462726 602 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 PABPC1P3-201ENST00000469174 459 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 RPL21P126-201ENST00000470049 478 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC013828.1-201ENST00000481845 158 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 MTCYBP16-201ENST00000509187 1129 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 MTCO1P30-201ENST00000515244 580 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 MIR2114-201ENST00000516645 80 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC138701.1-201ENST00000524329 714 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AL109766.1-201ENST00000555080 552 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AL360157.1-201ENST00000565962 87 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 RN7SL753P-201ENST00000581238 290 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC110741.2-201ENST00000605278 268 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC024257.5-201ENST00000612739 531 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC104763.3-201ENST00000613765 618 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC008083.4-201ENST00000615076 444 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 CYCSP41-201ENST00000616920 296 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC073968.1-201ENST00000618594 637 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 AC009318.4-201ENST00000620496 486 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 MIR7702-201ENST00000621931 59 ntBASIC4.08□□□□□ -1.76
VPS33AQ96AX1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS33AQ96AX1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 SNORA31-201ENST00000362607 130 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 RNA5SP175-201ENST00000364275 119 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 RNU6-761P-201ENST00000384148 107 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms