Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC079753.1-201ENST00000623243 3868 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 SNORA21-201ENST00000362423 132 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RNA5SP258-201ENST00000362750 119 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 SNORD16-201ENST00000362803 99 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RNU6-552P-201ENST00000362869 119 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 Y_RNA.188-201ENST00000363952 111 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 Y_RNA.530-201ENST00000384587 101 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 MIR558-201ENST00000384920 94 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 CISD1P1-201ENST00000393907 327 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AL606923.1-201ENST00000406616 190 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 SPTLC1P2-201ENST00000407089 121 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC114482.1-201ENST00000418010 247 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RPL34P3-201ENST00000421454 338 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 UBE2V1P13-201ENST00000436983 439 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC002553.3-201ENST00000453002 341 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RPS29P15-201ENST00000458329 171 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RNU6-864P-201ENST00000516256 108 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 RNA5SP92-201ENST00000516437 110 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC011979.2-201ENST00000527568 352 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AP005435.4-201ENST00000529514 284 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC103843.2-201ENST00000530523 682 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC010547.6-201ENST00000571789 193 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AL596245.1-201ENST00000618994 362 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 DHX40P1-201ENST00000588725 1412 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC009902.3-201ENST00000606235 2172 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 AC062022.1-201ENST00000451026 1684 ntBASIC6.55□□□□□ -1.36
RNF135Q8IUD6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC005332.9-201ENST00000620266 2921 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 RNU5A-8P-201ENST00000364102 114 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 U3.12-201ENST00000364498 214 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 Y_RNA.339-201ENST00000365325 102 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 Y_RNA.414-201ENST00000384011 101 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 RNU6-903P-201ENST00000391270 109 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 RPS27P18-201ENST00000431701 247 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC005077.1-201ENST00000449226 375 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC243772.1-201ENST00000451620 410 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC104073.1-201ENST00000451988 151 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 RNU7-182P-201ENST00000459009 62 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 RPL23AP11-201ENST00000475260 469 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AL135752.1-201ENST00000479477 471 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC093767.1-201ENST00000504523 156 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 FTH1P21-201ENST00000512179 511 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 OR4P1P-201ENST00000530808 1136 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC024224.1-201ENST00000538284 609 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC128657.1-201ENST00000549459 145 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 CYP2C61P-201ENST00000604072 290 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC245389.1-201ENST00000605141 529 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AL683813.2-201ENST00000605245 502 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 AC010424.2-201ENST00000607594 443 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 MIR6748-201ENST00000610433 71 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 U4.1-201ENST00000620349 87 ntBASIC6.54□□□□□ -1.36
RNF135Q8IUD6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF135Q8IUD6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms