Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 HMGB3P13-201ENST00000511263 607 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AC006499.2-201ENST00000513470 337 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 OR7H2P-201ENST00000513483 306 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 HNRNPKP5-201ENST00000515300 253 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AC090819.1-201ENST00000523800 1111 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AL110118.1-201ENST00000553543 400 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC008015.1-201ENST00000555505 465 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 MTND6P33-201ENST00000571794 183 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 MIR4480-201ENST00000582492 71 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 MIR4999-201ENST00000585029 91 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 OR4G1P-201ENST00000588632 938 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 VN1R90P-201ENST00000595717 726 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC006539.2-201ENST00000601729 572 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC025588.3-201ENST00000604182 274 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AL513477.2-201ENST00000607858 568 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC004948.1-201ENST00000609858 672 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC015813.4-201ENST00000610469 179 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AL136981.2-201ENST00000617319 734 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC009318.4-201ENST00000620496 486 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 MIR7154-201ENST00000620673 73 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC091953.3-201ENST00000623220 236 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AP000676.3-201ENST00000623299 569 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.71□□□□□ -1.82
CX3CL1P78423 U6.101-201ENST00000637707 76 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC103706.2-201ENST00000638080 240 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CX3CL1P78423 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 KPNA2P2-201ENST00000419546 1489 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 MTCO1P14-201ENST00000441695 1559 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CX3CL1P78423 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AL391994.1-201ENST00000254724 282 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 MIR448-201ENST00000362131 111 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 RN7SKP103-201ENST00000363848 320 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CL1P78423 RNU6-1200P-201ENST00000384162 107 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 RNY3P9-201ENST00000384727 106 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 MIR298-201ENST00000401212 88 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AL133270.1-201ENST00000402635 279 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AL356131.1-201ENST00000405826 414 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 PIGPP2-201ENST00000411569 458 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 ATG4AP1-201ENST00000416893 538 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC073335.1-201ENST00000427776 363 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AC006466.1-201ENST00000438721 289 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AC069285.2-201ENST00000440210 275 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CL1P78423 SETD6P1-201ENST00000444575 317 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 OR6K5P-201ENST00000447050 945 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AL133217.1-201ENST00000450980 425 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC006967.1-201ENST00000467608 589 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 PABPC1P3-201ENST00000469174 459 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 LINC00888-204ENST00000487386 421 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC108941.1-201ENST00000502853 530 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 ATP1B1P1-201ENST00000509767 915 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 XKRY-201ENST00000510392 1100 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AC005798.1-201ENST00000513715 387 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 DEFB131D-201ENST00000526803 184 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC007834.2-201ENST00000536310 343 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 CYCSP2-201ENST00000558168 301 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 MIR4637-201ENST00000582405 84 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms