Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC005242.1-201ENST00000585658 438 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AC006077.1-201ENST00000604746 343 ntBASIC3.45□□□□□ -1.86
VSX2P58304 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.45□□□□□ -1.86
VSX2P58304 AC020658.4-201ENST00000613987 684 ntBASIC3.45□□□□□ -1.86
VSX2P58304 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.45□□□□□ -1.86
VSX2P58304 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.45□□□□□ -1.86
VSX2P58304 CR392039.4-201ENST00000624968 501 ntBASIC3.45□□□□□ -1.86
VSX2P58304 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.45□□□□□ -1.86
VSX2P58304 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.45□□□□□ -1.86
VSX2P58304 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.44□□□□□ -1.86
VSX2P58304 GTF2H2B-203ENST00000508065 1432 ntBASIC3.44□□□□□ -1.86
VSX2P58304 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VSX2P58304 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VSX2P58304 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VSX2P58304 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VSX2P58304 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VSX2P58304 AL353692.2-201ENST00000407054 335 ntBASIC3.44□□□□□ -1.86
VSX2P58304 TRGV6-201ENST00000417928 299 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.44□□□□□ -1.86
VSX2P58304 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.44□□□□□ -1.86
VSX2P58304 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.44□□□□□ -1.86
VSX2P58304 ELOCP11-201ENST00000436690 332 ntBASIC3.44□□□□□ -1.86
VSX2P58304 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.44□□□□□ -1.86
VSX2P58304 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.44□□□□□ -1.86
VSX2P58304 ELOCP16-201ENST00000444494 332 ntBASIC3.44□□□□□ -1.86
VSX2P58304 RPL6P5-201ENST00000445678 828 ntBASIC3.44□□□□□ -1.86
VSX2P58304 MTND2P3-201ENST00000452458 470 ntBASIC3.44□□□□□ -1.86
VSX2P58304 MTCO3P20-201ENST00000454926 688 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AL136097.1-201ENST00000456945 913 ntBASIC3.44□□□□□ -1.86
VSX2P58304 SNORD105B-201ENST00000458770 79 ntBASIC3.44□□□□□ -1.86
VSX2P58304 RNU7-170P-201ENST00000459303 61 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC004801.2-202ENST00000463559 283 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.44□□□□□ -1.86
VSX2P58304 AC005726.1-201ENST00000494679 427 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC023050.1-201ENST00000498198 304 ntBASIC3.44□□□□□ -1.86
VSX2P58304 FTH1P24-201ENST00000503502 462 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.44□□□□□ -1.86
VSX2P58304 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.44□□□□□ -1.86
VSX2P58304 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.44□□□□□ -1.86
VSX2P58304 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.44□□□□□ -1.86
VSX2P58304 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.44□□□□□ -1.86
VSX2P58304 Vault.1-201ENST00000516474 102 ntBASIC3.44□□□□□ -1.86
VSX2P58304 RN7SKP83-201ENST00000516512 178 ntBASIC3.44□□□□□ -1.86
VSX2P58304 SNORA70.18-201ENST00000516696 98 ntBASIC3.44□□□□□ -1.86
VSX2P58304 RNU6-1231P-201ENST00000517185 103 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC004923.2-201ENST00000529649 369 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.44□□□□□ -1.86
VSX2P58304 AL161713.1-201ENST00000555538 145 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.44□□□□□ -1.86
VSX2P58304 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.44□□□□□ -1.86
VSX2P58304 AC106785.3-201ENST00000564064 847 ntBASIC3.44□□□□□ -1.86
VSX2P58304 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.44□□□□□ -1.86
VSX2P58304 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.44□□□□□ -1.86
VSX2P58304 AC069304.3-201ENST00000603938 1084 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC007423.1-201ENST00000605009 627 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC069209.1-201ENST00000619282 651 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AL732618.1-201ENST00000623251 301 ntBASIC3.44□□□□□ -1.86
VSX2P58304 AC004777.1-201ENST00000624317 287 ntBASIC3.44□□□□□ -1.86
VSX2P58304 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VSX2P58304 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VSX2P58304 AC007656.2-201ENST00000624902 4547 ntBASIC3.44□□□□□ -1.86
VSX2P58304 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.44□□□□□ -1.86
VSX2P58304 PRO1804-201ENST00000623780 2050 ntBASIC3.43□□□□□ -1.86
VSX2P58304 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.43□□□□□ -1.86
VSX2P58304 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
VSX2P58304 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
VSX2P58304 RNA5SP119-201ENST00000362715 117 ntBASIC3.43□□□□□ -1.86
VSX2P58304 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VSX2P58304 MIR7-3-201ENST00000384898 110 ntBASIC3.43□□□□□ -1.86
VSX2P58304 MIR218-2-201ENST00000385006 110 ntBASIC3.43□□□□□ -1.86
VSX2P58304 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VSX2P58304 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.43□□□□□ -1.86
VSX2P58304 AC127526.1-201ENST00000417526 366 ntBASIC3.43□□□□□ -1.86
VSX2P58304 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.43□□□□□ -1.86
VSX2P58304 RPL30P3-201ENST00000424262 333 ntBASIC3.43□□□□□ -1.86
VSX2P58304 YME1L1P1-201ENST00000429435 297 ntBASIC3.43□□□□□ -1.86
VSX2P58304 AC073063.1-201ENST00000434352 607 ntBASIC3.43□□□□□ -1.86
VSX2P58304 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.43□□□□□ -1.86
VSX2P58304 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.43□□□□□ -1.86
VSX2P58304 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.43□□□□□ -1.86
VSX2P58304 AC073387.1-201ENST00000453261 709 ntBASIC3.43□□□□□ -1.86
VSX2P58304 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.43□□□□□ -1.86
VSX2P58304 RPL23AP62-201ENST00000463396 453 ntBASIC3.43□□□□□ -1.86
VSX2P58304 AC010683.1-201ENST00000473673 378 ntBASIC3.43□□□□□ -1.86
VSX2P58304 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.43□□□□□ -1.86
VSX2P58304 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.43□□□□□ -1.86
VSX2P58304 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.43□□□□□ -1.86
VSX2P58304 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.43□□□□□ -1.86
VSX2P58304 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
VSX2P58304 IGKV2-23-201ENST00000518729 323 ntBASIC3.43□□□□□ -1.86
VSX2P58304 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.43□□□□□ -1.86
VSX2P58304 AP002812.4-201ENST00000532139 286 ntBASIC3.43□□□□□ -1.86
VSX2P58304 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.43□□□□□ -1.86
VSX2P58304 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.43□□□□□ -1.86
VSX2P58304 MIR3922-201ENST00000585192 84 ntBASIC3.43□□□□□ -1.86
VSX2P58304 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms