Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PEX3P56589 NCAPGP1-201ENST00000505112 1814 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AL359837.1-201ENST00000381357 287 ntBASIC4.03□□□□□ -1.76
PEX3P56589 RNU1-89P-201ENST00000384592 164 ntBASIC4.03□□□□□ -1.76
PEX3P56589 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PEX3P56589 HMGN2P8-201ENST00000391458 268 ntBASIC4.03□□□□□ -1.76
PEX3P56589 ATP5F1P4-201ENST00000397288 746 ntBASIC4.03□□□□□ -1.76
PEX3P56589 RNA5SP239-201ENST00000410218 129 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.03□□□□□ -1.76
PEX3P56589 AC008173.1-201ENST00000418901 264 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AC092685.1-201ENST00000447960 1243 ntBASIC4.03□□□□□ -1.76
PEX3P56589 RPS3AP46-201ENST00000448352 682 ntBASIC4.03□□□□□ -1.76
PEX3P56589 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.03□□□□□ -1.76
PEX3P56589 AC099563.1-201ENST00000456086 418 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AC006511.1-201ENST00000470614 315 ntBASIC4.03□□□□□ -1.76
PEX3P56589 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.03□□□□□ -1.76
PEX3P56589 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.03□□□□□ -1.76
PEX3P56589 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.03□□□□□ -1.76
PEX3P56589 AC092851.1-201ENST00000535964 478 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AC006518.1-201ENST00000541449 943 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AC023161.2-201ENST00000551218 780 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AL121594.4-201ENST00000556211 1196 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.03□□□□□ -1.76
PEX3P56589 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.03□□□□□ -1.76
PEX3P56589 AC141257.3-201ENST00000572906 215 ntBASIC4.03□□□□□ -1.76
PEX3P56589 MIR4644-201ENST00000579929 84 ntBASIC4.03□□□□□ -1.76
PEX3P56589 ZNF92P3-201ENST00000596594 954 ntBASIC4.03□□□□□ -1.76
PEX3P56589 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 BNIP3P27-201ENST00000599991 412 ntBASIC4.03□□□□□ -1.76
PEX3P56589 AC090525.3-201ENST00000605601 189 ntBASIC4.03□□□□□ -1.76
PEX3P56589 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.03□□□□□ -1.76
PEX3P56589 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.03□□□□□ -1.76
PEX3P56589 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.03□□□□□ -1.76
PEX3P56589 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PEX3P56589 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PEX3P56589 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PEX3P56589 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.03□□□□□ -1.77
PEX3P56589 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.77
PEX3P56589 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PEX3P56589 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.02□□□□□ -1.77
PEX3P56589 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PEX3P56589 HSPA8P19-201ENST00000505359 1517 ntBASIC4.02□□□□□ -1.77
PEX3P56589 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PEX3P56589 AC009313.2-201ENST00000417893 1941 ntBASIC4.02□□□□□ -1.77
PEX3P56589 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PEX3P56589 ATP5F1P3-201ENST00000397213 657 ntBASIC4.02□□□□□ -1.77
PEX3P56589 SNORA11-201ENST00000408789 128 ntBASIC4.02□□□□□ -1.77
PEX3P56589 RN7SKP27-201ENST00000410684 333 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 LINC01881-201ENST00000416103 412 ntBASIC4.02□□□□□ -1.77
PEX3P56589 SYF2P2-201ENST00000417620 583 ntBASIC4.02□□□□□ -1.77
PEX3P56589 IFNNP1-201ENST00000429219 553 ntBASIC4.02□□□□□ -1.77
PEX3P56589 RPS7P2-201ENST00000435134 607 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 RPL7P29-201ENST00000437151 728 ntBASIC4.02□□□□□ -1.77
PEX3P56589 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 ELOCP10-201ENST00000440624 327 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AC239367.2-201ENST00000447309 705 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AC010655.1-201ENST00000449336 292 ntBASIC4.02□□□□□ -1.77
PEX3P56589 RNU6-1218P-201ENST00000458990 108 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AC018635.1-201ENST00000468292 1030 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 AC104619.4-201ENST00000510773 249 ntBASIC4.02□□□□□ -1.77
PEX3P56589 IGKV2D-23-201ENST00000518179 286 ntBASIC4.02□□□□□ -1.77
PEX3P56589 HMGB1P23-201ENST00000518743 568 ntBASIC4.02□□□□□ -1.77
PEX3P56589 IGHV3-32-201ENST00000519182 355 ntBASIC4.02□□□□□ -1.77
PEX3P56589 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
PEX3P56589 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.02□□□□□ -1.77
PEX3P56589 AC091515.1-201ENST00000548110 679 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.02□□□□□ -1.77
PEX3P56589 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.02□□□□□ -1.77
PEX3P56589 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 ELOCP34-201ENST00000604436 327 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AC245389.1-201ENST00000605141 529 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AC022306.3-201ENST00000619930 550 ntBASIC4.02□□□□□ -1.77
PEX3P56589 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 AL034408.1-202ENST00000636088 415 ntBASIC4.02□□□□□ -1.77
PEX3P56589 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PEX3P56589 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.02□□□□□ -1.77
PEX3P56589 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PEX3P56589 AC007823.1-201ENST00000569932 1566 ntBASIC4.02□□□□□ -1.77
PEX3P56589 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.02□□□□□ -1.77
PEX3P56589 SAGE2P-201ENST00000420011 2126 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms