Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 RFC5P1-201ENST00000454419 874 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH13P55290 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 AC093755.1-201ENST00000512950 1023 ntBASIC4.09□□□□□ -1.75
CDH13P55290 RNA5SP519-201ENST00000516480 119 ntBASIC4.09□□□□□ -1.75
CDH13P55290 RNA5SP73-201ENST00000516744 108 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AC027309.2-201ENST00000520566 192 ntBASIC4.09□□□□□ -1.75
CDH13P55290 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 AP001189.2-201ENST00000527320 189 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.09□□□□□ -1.75
CDH13P55290 AGGF1P8-201ENST00000562979 1000 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 AC007566.2-201ENST00000603642 413 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AC026790.2-201ENST00000606282 430 ntBASIC4.09□□□□□ -1.75
CDH13P55290 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH13P55290 AC034229.4-201ENST00000607861 441 ntBASIC4.09□□□□□ -1.75
CDH13P55290 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 AC233309.1-201ENST00000619522 751 ntBASIC4.09□□□□□ -1.75
CDH13P55290 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH13P55290 MIR7702-201ENST00000621931 59 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AL356121.2-201ENST00000624715 780 ntBASIC4.09□□□□□ -1.75
CDH13P55290 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 IQCB2P-201ENST00000401788 1633 ntBASIC4.09□□□□□ -1.76
CDH13P55290 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDH13P55290 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.08□□□□□ -1.76
CDH13P55290 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH13P55290 RNU1-14P-201ENST00000362759 152 ntBASIC4.08□□□□□ -1.76
CDH13P55290 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 RNU6-1226P-201ENST00000384317 107 ntBASIC4.08□□□□□ -1.76
CDH13P55290 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH13P55290 RPS3AP23-201ENST00000401762 784 ntBASIC4.08□□□□□ -1.76
CDH13P55290 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
CDH13P55290 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH13P55290 AL136133.1-201ENST00000413694 376 ntBASIC4.08□□□□□ -1.76
CDH13P55290 JKAMPP1-201ENST00000413804 919 ntBASIC4.08□□□□□ -1.76
CDH13P55290 LUZP4P1-201ENST00000415420 344 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 AL590139.1-201ENST00000416267 400 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AC119751.6-201ENST00000416712 186 ntBASIC4.08□□□□□ -1.76
CDH13P55290 MRPS36P1-201ENST00000421291 307 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH13P55290 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH13P55290 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH13P55290 CEACAMP9-201ENST00000442990 513 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH13P55290 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH13P55290 AC005410.1-202ENST00000460347 485 ntBASIC4.08□□□□□ -1.76
CDH13P55290 RPL5P24-201ENST00000463742 885 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AC146507.1-201ENST00000468335 354 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AC011979.1-201ENST00000472300 483 ntBASIC4.08□□□□□ -1.76
CDH13P55290 GAPDHP36-201ENST00000480688 918 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AC108734.3-201ENST00000481241 1165 ntBASIC4.08□□□□□ -1.76
CDH13P55290 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH13P55290 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH13P55290 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 RNU6-311P-201ENST00000516224 102 ntBASIC4.08□□□□□ -1.76
CDH13P55290 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH13P55290 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH13P55290 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH13P55290 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH13P55290 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH13P55290 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH13P55290 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH13P55290 GAS5-AS1-201ENST00000602767 694 ntBASIC4.08□□□□□ -1.76
CDH13P55290 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH13P55290 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 AC009974.1-201ENST00000608881 455 ntBASIC4.08□□□□□ -1.76
CDH13P55290 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 MKKS-204ENST00000639674 192 ntBASIC4.08□□□□□ -1.76
CDH13P55290 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH13P55290 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH13P55290 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH13P55290 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH13P55290 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH13P55290 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH13P55290 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH13P55290 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH13P55290 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH13P55290 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CDH13P55290 NACA3P-201ENST00000359690 648 ntBASIC4.07□□□□□ -1.76
CDH13P55290 RNU6-560P-201ENST00000364007 108 ntBASIC4.07□□□□□ -1.76
CDH13P55290 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms