Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.8□□□□□ -1.64
COPB1P53618 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COPB1P53618 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 AC119751.6-201ENST00000416712 186 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AL139095.3-201ENST00000419672 1203 ntBASIC4.79□□□□□ -1.64
COPB1P53618 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.79□□□□□ -1.64
COPB1P53618 C4BPAP2-201ENST00000428434 478 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 AC114495.1-201ENST00000441274 436 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.79□□□□□ -1.64
COPB1P53618 CEACAMP6-201ENST00000452007 574 ntBASIC4.79□□□□□ -1.64
COPB1P53618 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 PNPLA4P1-201ENST00000458328 305 ntBASIC4.79□□□□□ -1.64
COPB1P53618 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 MTCO3P7-201ENST00000510008 774 ntBASIC4.79□□□□□ -1.64
COPB1P53618 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 MTCO2P32-201ENST00000514865 403 ntBASIC4.79□□□□□ -1.64
COPB1P53618 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 RNU6-1225P-201ENST00000516336 65 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.79□□□□□ -1.64
COPB1P53618 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COPB1P53618 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 AP005119.2-201ENST00000579735 1105 ntBASIC4.79□□□□□ -1.64
COPB1P53618 OR4K7P-201ENST00000580232 945 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.79□□□□□ -1.64
COPB1P53618 AC018714.1-201ENST00000605028 208 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AC015813.4-201ENST00000610469 179 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AL133243.1-201ENST00000614487 366 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.79□□□□□ -1.64
COPB1P53618 AL607023.1-201ENST00000620045 248 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AC073348.1-201ENST00000623002 331 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AC016717.3-201ENST00000624730 554 ntBASIC4.79□□□□□ -1.64
COPB1P53618 AC087359.1-201ENST00000508335 1740 ntBASIC4.79□□□□□ -1.64
COPB1P53618 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COPB1P53618 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COPB1P53618 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
COPB1P53618 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPB1P53618 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 MTND4P34-201ENST00000572715 1371 ntBASIC4.78□□□□□ -1.64
COPB1P53618 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COPB1P53618 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COPB1P53618 AC011266.1-201ENST00000624119 3569 ntBASIC4.78□□□□□ -1.64
COPB1P53618 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COPB1P53618 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COPB1P53618 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.78□□□□□ -1.64
COPB1P53618 AC046144.1-201ENST00000478559 1853 ntBASIC4.78□□□□□ -1.64
COPB1P53618 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.78□□□□□ -1.64
COPB1P53618 TAF9BP1-201ENST00000396646 746 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC097374.1-203ENST00000400783 485 ntBASIC4.78□□□□□ -1.64
COPB1P53618 MIR298-201ENST00000401212 88 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AL590290.1-201ENST00000405336 380 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.78□□□□□ -1.64
COPB1P53618 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.78□□□□□ -1.64
COPB1P53618 AL022400.1-201ENST00000423946 935 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.78□□□□□ -1.64
COPB1P53618 UBE2V1P5-201ENST00000440070 405 ntBASIC4.78□□□□□ -1.64
COPB1P53618 YWHAQP9-201ENST00000445891 512 ntBASIC4.78□□□□□ -1.64
COPB1P53618 MTND2P19-201ENST00000449129 1012 ntBASIC4.78□□□□□ -1.64
COPB1P53618 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 RPL7AP52-201ENST00000458096 790 ntBASIC4.78□□□□□ -1.64
COPB1P53618 SETP11-201ENST00000473027 690 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 ATP1B1P1-201ENST00000509767 915 ntBASIC4.78□□□□□ -1.64
COPB1P53618 RNA5SP154-201ENST00000516193 111 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.78□□□□□ -1.64
COPB1P53618 IGKV1-32-201ENST00000519290 311 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC018442.3-201ENST00000523025 183 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC022882.1-201ENST00000532142 501 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.78□□□□□ -1.64
COPB1P53618 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.78□□□□□ -1.64
COPB1P53618 AL352979.3-201ENST00000553515 247 ntBASIC4.78□□□□□ -1.64
COPB1P53618 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 AC090312.2-201ENST00000582687 378 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.78□□□□□ -1.64
COPB1P53618 AP003973.1-201ENST00000604639 691 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AL008729.2-201ENST00000606393 473 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms