Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OR5AN2P-201ENST00000534535 896 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNFP41002 AC123904.2-201ENST00000548059 300 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNFP41002 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNFP41002 MIR4504-201ENST00000577413 92 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AC007621.1-201ENST00000604544 437 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AC068722.2-201ENST00000618734 544 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AL136221.1-201ENST00000621449 509 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AP006248.2-201ENST00000623309 592 ntBASIC5.6□□□□□ -1.51
CCNFP41002 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 AC097504.1-201ENST00000515103 2415 ntBASIC5.6□□□□□ -1.51
CCNFP41002 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.6□□□□□ -1.51
CCNFP41002 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNFP41002 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNFP41002 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNFP41002 THAP12P5-201ENST00000405864 2275 ntBASIC5.59□□□□□ -1.51
CCNFP41002 KPNA2P2-201ENST00000419546 1489 ntBASIC5.59□□□□□ -1.51
CCNFP41002 NMD3P1-201ENST00000439704 1488 ntBASIC5.59□□□□□ -1.51
CCNFP41002 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNFP41002 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 OR5J1P-201ENST00000313544 939 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AL159987.1-201ENST00000347911 293 ntBASIC5.59□□□□□ -1.51
CCNFP41002 RNU4-76P-201ENST00000364509 141 ntBASIC5.59□□□□□ -1.51
CCNFP41002 Y_RNA.263-201ENST00000364659 114 ntBASIC5.59□□□□□ -1.51
CCNFP41002 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 RNA5SP122-201ENST00000384457 108 ntBASIC5.59□□□□□ -1.51
CCNFP41002 RPL23AP32-201ENST00000395315 459 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AC211486.3-201ENST00000412694 621 ntBASIC5.59□□□□□ -1.51
CCNFP41002 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNFP41002 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNFP41002 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 GTF2IP20-201ENST00000431663 360 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNFP41002 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNFP41002 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNFP41002 SNRPGP6-201ENST00000451124 220 ntBASIC5.59□□□□□ -1.51
CCNFP41002 RAD23BP3-201ENST00000454157 1152 ntBASIC5.59□□□□□ -1.51
CCNFP41002 RNU6-420P-201ENST00000458780 107 ntBASIC5.59□□□□□ -1.51
CCNFP41002 PPIAP21-201ENST00000464473 501 ntBASIC5.59□□□□□ -1.51
CCNFP41002 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNFP41002 AC023424.1-201ENST00000496058 459 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.59□□□□□ -1.51
CCNFP41002 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNFP41002 RFPL4AP5-201ENST00000514977 504 ntBASIC5.59□□□□□ -1.51
CCNFP41002 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNFP41002 Y_RNA.675-201ENST00000516389 149 ntBASIC5.59□□□□□ -1.51
CCNFP41002 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNFP41002 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.59□□□□□ -1.51
CCNFP41002 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNFP41002 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNFP41002 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCNFP41002 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCNFP41002 RN7SL753P-201ENST00000581238 290 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 AC087283.1-201ENST00000604029 1074 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AC121334.2-201ENST00000605387 271 ntBASIC5.59□□□□□ -1.51
CCNFP41002 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 AC126175.1-201ENST00000617041 758 ntBASIC5.59□□□□□ -1.51
CCNFP41002 RN7SL544P-201ENST00000617232 284 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AC009159.1-201ENST00000618386 642 ntBASIC5.59□□□□□ -1.51
CCNFP41002 RN7SL763P-201ENST00000620922 284 ntBASIC5.59□□□□□ -1.51
CCNFP41002 AC000123.2-201ENST00000623124 461 ntBASIC5.59□□□□□ -1.51
CCNFP41002 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCNFP41002 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 AC100757.1-201ENST00000616872 1835 ntBASIC5.59□□□□□ -1.51
CCNFP41002 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNFP41002 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNFP41002 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNFP41002 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCNFP41002 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
CCNFP41002 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCNFP41002 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
CCNFP41002 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
CCNFP41002 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CCNFP41002 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.58□□□□□ -1.52
CCNFP41002 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCNFP41002 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.58□□□□□ -1.52
CCNFP41002 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CCNFP41002 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNFP41002 AC026523.2-201ENST00000625039 7739 ntBASIC5.58□□□□□ -1.52
CCNFP41002 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNFP41002 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCNFP41002 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNFP41002 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNFP41002 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.58□□□□□ -1.52
CCNFP41002 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms