Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC004943.3-201ENST00000624116 600 ntBASIC4.16□□□□□ -1.74
PTPN3P26045 AL773545.4-201ENST00000637262 310 ntBASIC4.16□□□□□ -1.74
PTPN3P26045 AL513478.4-201ENST00000641636 310 ntBASIC4.16□□□□□ -1.74
PTPN3P26045 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN3P26045 MTND4P26-201ENST00000415971 1359 ntBASIC4.15□□□□□ -1.74
PTPN3P26045 ELL2P4-201ENST00000446870 1376 ntBASIC4.15□□□□□ -1.74
PTPN3P26045 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN3P26045 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.15□□□□□ -1.74
PTPN3P26045 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN3P26045 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.74
PTPN3P26045 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN3P26045 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN3P26045 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
PTPN3P26045 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN3P26045 RNU11-4P-201ENST00000391149 133 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 GSTA8P-201ENST00000404253 637 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 MIR1250-201ENST00000408098 113 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 SNORA3C-201ENST00000408792 125 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 RNA5SP239-201ENST00000410218 129 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 RNU6-575P-201ENST00000411326 105 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN3P26045 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 AC233981.1-201ENST00000423224 461 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 C1DP1-201ENST00000426049 402 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 MTCYBP32-201ENST00000427945 1084 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC010881.1-201ENST00000433830 235 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN3P26045 AL353748.1-201ENST00000440753 474 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN3P26045 RPS4XP4-201ENST00000443195 763 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN3P26045 NUTF2P3-201ENST00000448540 384 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 AC009220.1-201ENST00000451614 275 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 NPM1P13-201ENST00000452663 865 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC010469.1-201ENST00000463864 576 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN3P26045 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PTPN3P26045 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 OR51K1P-201ENST00000510214 950 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC093755.1-201ENST00000512950 1023 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 OR10V3P-201ENST00000525712 725 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 OR6C73P-201ENST00000546432 358 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN3P26045 MTCYBP23-201ENST00000558717 1102 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN3P26045 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN3P26045 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN3P26045 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN3P26045 AL020997.3-201ENST00000602843 359 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AL583856.2-201ENST00000606298 543 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AP000238.1-201ENST00000608759 426 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC006338.2-201ENST00000616864 791 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC010975.3-201ENST00000618727 978 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PTPN3P26045 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN3P26045 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN3P26045 AC068254.2-201ENST00000623938 3577 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 AC026951.1-201ENST00000559530 2459 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN3P26045 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN3P26045 MAPK10-253ENST00000641010 4072 ntBASIC4.15□□□□□ -1.75
PTPN3P26045 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN3P26045 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN3P26045 MTND5P3-201ENST00000438536 1800 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN3P26045 OR11H4-201ENST00000315409 1082 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 MIR141-201ENST00000384975 95 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AL079342.2-201ENST00000403367 482 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 RNA5SP104-201ENST00000410989 118 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 RPS3AP9-201ENST00000417027 792 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AL449283.1-202ENST00000418249 604 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN3P26045 Z80107.1-201ENST00000436830 412 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC069285.2-201ENST00000440210 275 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 RPL23AP33-201ENST00000442301 452 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 HMGB3P6-201ENST00000444896 598 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.14□□□□□ -1.75
PTPN3P26045 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 AL009048.1-201ENST00000450437 298 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 RPL38P1-201ENST00000460914 211 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 GAPDHP36-201ENST00000480688 918 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 RPL31P61-201ENST00000496160 376 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN3P26045 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms