Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH3P22223 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 RN7SKP182-201ENST00000410772 298 ntBASIC4.1□□□□□ -1.75
CDH3P22223 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH3P22223 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.1□□□□□ -1.75
CDH3P22223 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 COX6B1P7-201ENST00000430845 235 ntBASIC4.1□□□□□ -1.75
CDH3P22223 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.1□□□□□ -1.75
CDH3P22223 RPL23AP46-201ENST00000438548 490 ntBASIC4.1□□□□□ -1.75
CDH3P22223 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH3P22223 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 AC068305.1-201ENST00000497406 726 ntBASIC4.1□□□□□ -1.75
CDH3P22223 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 NDUFB4P9-201ENST00000511646 388 ntBASIC4.1□□□□□ -1.75
CDH3P22223 snoZ278.1-201ENST00000517059 112 ntBASIC4.1□□□□□ -1.75
CDH3P22223 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 MTCO3P15-201ENST00000526563 574 ntBASIC4.1□□□□□ -1.75
CDH3P22223 DEFB130C-202ENST00000530001 230 ntBASIC4.1□□□□□ -1.75
CDH3P22223 PTP4A1P6-201ENST00000531034 478 ntBASIC4.1□□□□□ -1.75
CDH3P22223 LRRC6P1-201ENST00000532188 885 ntBASIC4.1□□□□□ -1.75
CDH3P22223 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH3P22223 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH3P22223 AL109766.1-201ENST00000555080 552 ntBASIC4.1□□□□□ -1.75
CDH3P22223 AL158211.1-201ENST00000566763 763 ntBASIC4.1□□□□□ -1.75
CDH3P22223 AC006116.5-201ENST00000591936 559 ntBASIC4.1□□□□□ -1.75
CDH3P22223 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.1□□□□□ -1.75
CDH3P22223 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.1□□□□□ -1.75
CDH3P22223 AC138649.5-201ENST00000637456 137 ntBASIC4.1□□□□□ -1.75
CDH3P22223 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH3P22223 Z82217.1-201ENST00000625157 8149 ntBASIC4.1□□□□□ -1.75
CDH3P22223 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH3P22223 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDH3P22223 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDH3P22223 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH3P22223 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDH3P22223 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH3P22223 RNU4-51P-201ENST00000364206 140 ntBASIC4.09□□□□□ -1.75
CDH3P22223 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH3P22223 RNU6-224P-201ENST00000384055 107 ntBASIC4.09□□□□□ -1.75
CDH3P22223 RNU2-65P-201ENST00000410162 185 ntBASIC4.09□□□□□ -1.75
CDH3P22223 RNU6-575P-201ENST00000411326 105 ntBASIC4.09□□□□□ -1.75
CDH3P22223 MTATP6P20-201ENST00000414147 562 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH3P22223 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 RPL21P110-201ENST00000433345 446 ntBASIC4.09□□□□□ -1.75
CDH3P22223 BTF3P10-201ENST00000433415 495 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AC079804.1-201ENST00000461922 436 ntBASIC4.09□□□□□ -1.75
CDH3P22223 NAP1L1P3-201ENST00000462291 880 ntBASIC4.09□□□□□ -1.75
CDH3P22223 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 RPS29P19-201ENST00000479709 171 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC079203.1-201ENST00000487972 404 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AP001086.1-201ENST00000494882 321 ntBASIC4.09□□□□□ -1.75
CDH3P22223 RPL21P131-201ENST00000497298 483 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 MIR2116-201ENST00000517221 80 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AC006064.5-201ENST00000541782 248 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AC025884.1-201ENST00000556034 378 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH3P22223 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH3P22223 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH3P22223 PCNAP1-202ENST00000595299 752 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AL161729.3-201ENST00000603533 673 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC009974.1-201ENST00000608881 455 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AL121895.2-201ENST00000619558 447 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC090506.2-201ENST00000624521 419 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AL109659.3-201ENST00000624985 950 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC068724.3-201ENST00000625906 87 ntBASIC4.09□□□□□ -1.75
CDH3P22223 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH3P22223 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH3P22223 MTND4P10-201ENST00000446199 1363 ntBASIC4.09□□□□□ -1.75
CDH3P22223 AC025263.3-201ENST00000622965 1396 ntBASIC4.09□□□□□ -1.75
CDH3P22223 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 AC066616.2-201ENST00000559334 1481 ntBASIC4.09□□□□□ -1.75
CDH3P22223 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH3P22223 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.09□□□□□ -1.76
CDH3P22223 HSPA8P1-201ENST00000425843 1833 ntBASIC4.09□□□□□ -1.76
CDH3P22223 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
CDH3P22223 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms