Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC3P19447 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.27□□□□□ -1.41
ERCC3P19447 RNA5SP305-201ENST00000362665 119 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 Y_RNA.248-201ENST00000364501 109 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ERCC3P19447 RPL17P50-201ENST00000396131 546 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 RN7SKP216-201ENST00000411050 312 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 CYCSP10-201ENST00000417973 294 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 RNF10P1-201ENST00000418589 369 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.27□□□□□ -1.41
ERCC3P19447 GSTM5P1-201ENST00000434751 660 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.27□□□□□ -1.41
ERCC3P19447 DNAJC19P4-201ENST00000440115 345 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 AL353572.1-201ENST00000442490 417 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC3P19447 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC004924.1-201ENST00000480160 781 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC3P19447 NDUFB5P1-201ENST00000508134 564 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 AC010493.1-201ENST00000513479 292 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC3P19447 Y_RNA.672-201ENST00000516289 104 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 SCARNA16.4-201ENST00000516956 187 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC124947.2-202ENST00000552735 133 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 OR1F2P-201ENST00000570470 933 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC3P19447 AP005403.1-201ENST00000579720 229 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC3P19447 AL353997.4-201ENST00000586196 166 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC3P19447 AC121334.2-201ENST00000605387 271 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC3P19447 AL157786.1-207ENST00000627771 695 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 LRRC77P-213ENST00000637727 880 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 AC074101.1-201ENST00000637861 241 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ERCC3P19447 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC3P19447 AC002525.1-201ENST00000624392 1622 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 AC005332.5-201ENST00000591222 2919 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC3P19447 NUP58P1-201ENST00000502546 1738 ntBASIC6.27□□□□□ -1.41
ERCC3P19447 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.27□□□□□ -1.41
ERCC3P19447 OR55B1P-203ENST00000641518 2602 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC3P19447 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC3P19447 U8.3-201ENST00000363321 132 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 SNORD115.1-201ENST00000391109 76 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 GSTA9P-201ENST00000406231 611 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 OR4K12P-201ENST00000406538 961 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 Y_RNA.625-201ENST00000411256 107 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC093655.2-201ENST00000425735 631 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 TMEM183AP1-205ENST00000432739 290 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 RPL7P11-201ENST00000437586 658 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC073850.1-201ENST00000449243 255 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 MTND6P2-201ENST00000512226 524 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AC093677.1-201ENST00000514414 678 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AC093853.1-201ENST00000515689 483 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AC022616.6-201ENST00000520479 119 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.26□□□□□ -1.41
ERCC3P19447 AP003122.4-201ENST00000530980 758 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AL359219.2-201ENST00000555184 348 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC034268.2-201ENST00000571784 482 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 MIR4436B2-201ENST00000581415 91 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 MIR4436B1-201ENST00000583272 91 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 H3F3BP2-201ENST00000583907 357 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.26□□□□□ -1.41
ERCC3P19447 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.26□□□□□ -1.41
ERCC3P19447 DUXAP4-201ENST00000603046 613 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AC104687.2-201ENST00000604442 342 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 AC009268.2-201ENST00000621925 457 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 MIR4496-201ENST00000635896 61 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
ERCC3P19447 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC3P19447 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
ERCC3P19447 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms