Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LIG1P18858 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.18□□□□□ -1.42
LIG1P18858 RNU6-1227P-201ENST00000383981 107 ntBASIC6.18□□□□□ -1.42
LIG1P18858 AC073264.1-201ENST00000411508 416 ntBASIC6.18□□□□□ -1.42
LIG1P18858 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.18□□□□□ -1.42
LIG1P18858 RPL6P29-201ENST00000414863 865 ntBASIC6.18□□□□□ -1.42
LIG1P18858 BMS1P17-202ENST00000416720 316 ntBASIC6.18□□□□□ -1.42
LIG1P18858 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.18□□□□□ -1.42
LIG1P18858 RPS26P47-201ENST00000427219 348 ntBASIC6.18□□□□□ -1.42
LIG1P18858 FCF1P1-201ENST00000432690 571 ntBASIC6.18□□□□□ -1.42
LIG1P18858 AC002486.1-201ENST00000435098 391 ntBASIC6.18□□□□□ -1.42
LIG1P18858 OR6D1P-201ENST00000436165 939 ntBASIC6.18□□□□□ -1.42
LIG1P18858 MTND6P18-201ENST00000439477 513 ntBASIC6.18□□□□□ -1.42
LIG1P18858 FABP3P2-201ENST00000453169 399 ntBASIC6.18□□□□□ -1.42
LIG1P18858 RPL35P6-201ENST00000490024 372 ntBASIC6.18□□□□□ -1.42
LIG1P18858 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.18□□□□□ -1.42
LIG1P18858 AC098976.1-201ENST00000513014 541 ntBASIC6.18□□□□□ -1.42
LIG1P18858 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.18□□□□□ -1.42
LIG1P18858 AP003467.2-201ENST00000520175 319 ntBASIC6.18□□□□□ -1.42
LIG1P18858 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.18□□□□□ -1.42
LIG1P18858 AC013828.2-201ENST00000532487 235 ntBASIC6.18□□□□□ -1.42
LIG1P18858 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.18□□□□□ -1.42
LIG1P18858 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.18□□□□□ -1.42
LIG1P18858 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.18□□□□□ -1.42
LIG1P18858 AC022432.1-201ENST00000595739 310 ntBASIC6.18□□□□□ -1.42
LIG1P18858 BNIP3P10-201ENST00000605360 577 ntBASIC6.18□□□□□ -1.42
LIG1P18858 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LIG1P18858 CU639417.4-201ENST00000623928 207 ntBASIC6.18□□□□□ -1.42
LIG1P18858 AC110994.2-201ENST00000635481 492 ntBASIC6.18□□□□□ -1.42
LIG1P18858 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.18□□□□□ -1.42
LIG1P18858 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
LIG1P18858 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
LIG1P18858 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIG1P18858 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
LIG1P18858 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.18□□□□□ -1.42
LIG1P18858 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.17□□□□□ -1.42
LIG1P18858 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.17□□□□□ -1.42
LIG1P18858 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LIG1P18858 AC006210.2-201ENST00000367074 1545 ntBASIC6.17□□□□□ -1.42
LIG1P18858 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LIG1P18858 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LIG1P18858 RNU6-878P-201ENST00000384578 110 ntBASIC6.17□□□□□ -1.42
LIG1P18858 RNU6-225P-201ENST00000384613 103 ntBASIC6.17□□□□□ -1.42
LIG1P18858 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LIG1P18858 AL049693.1-201ENST00000402760 611 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 COX5BP7-201ENST00000414780 274 ntBASIC6.17□□□□□ -1.42
LIG1P18858 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.17□□□□□ -1.42
LIG1P18858 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC099336.2-201ENST00000422457 254 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.17□□□□□ -1.42
LIG1P18858 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.17□□□□□ -1.42
LIG1P18858 AC079448.1-201ENST00000449377 373 ntBASIC6.17□□□□□ -1.42
LIG1P18858 SNRPGP6-201ENST00000451124 220 ntBASIC6.17□□□□□ -1.42
LIG1P18858 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.17□□□□□ -1.42
LIG1P18858 AC099560.2-201ENST00000457554 255 ntBASIC6.17□□□□□ -1.42
LIG1P18858 RNU7-27P-201ENST00000459281 62 ntBASIC6.17□□□□□ -1.42
LIG1P18858 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 KLRA1P-201ENST00000503499 986 ntBASIC6.17□□□□□ -1.42
LIG1P18858 HMGN1P13-201ENST00000505795 138 ntBASIC6.17□□□□□ -1.42
LIG1P18858 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 EIF3KP3-201ENST00000514461 639 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.17□□□□□ -1.42
LIG1P18858 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.17□□□□□ -1.42
LIG1P18858 HIGD1AP6-201ENST00000521833 279 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.17□□□□□ -1.42
LIG1P18858 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.17□□□□□ -1.42
LIG1P18858 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.17□□□□□ -1.42
LIG1P18858 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.17□□□□□ -1.42
LIG1P18858 MIR1273E-201ENST00000581165 102 ntBASIC6.17□□□□□ -1.42
LIG1P18858 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.17□□□□□ -1.42
LIG1P18858 MIR4795-201ENST00000584182 89 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC055876.5-201ENST00000605667 259 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC097468.3-201ENST00000607956 456 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.17□□□□□ -1.42
LIG1P18858 MIR7973-1-201ENST00000614683 76 ntBASIC6.17□□□□□ -1.42
LIG1P18858 AC090574.1-201ENST00000623186 233 ntBASIC6.17□□□□□ -1.42
LIG1P18858 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.17□□□□□ -1.42
LIG1P18858 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIG1P18858 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.17□□□□□ -1.42
LIG1P18858 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIG1P18858 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.16□□□□□ -1.42
LIG1P18858 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIG1P18858 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIG1P18858 RN7SKP124-201ENST00000364730 341 ntBASIC6.16□□□□□ -1.42
LIG1P18858 RNY4P34-201ENST00000364779 95 ntBASIC6.16□□□□□ -1.42
LIG1P18858 RNU6-809P-201ENST00000384461 107 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms