Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SNRPFP3-201ENST00000457792 225 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 RN7SL643P-201ENST00000471845 291 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 VN1R17P-201ENST00000472048 1090 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 RN7SL177P-201ENST00000476596 299 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFAP04085 AC012181.1-201ENST00000479895 423 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 AC022206.1-201ENST00000495947 347 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 RNU6-864P-201ENST00000516256 108 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFAP04085 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFAP04085 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.85□□□□□ -1.47
PDGFAP04085 MIR4703-201ENST00000577728 79 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AC006270.2-201ENST00000578523 652 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFAP04085 MIR4424-201ENST00000585257 86 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFAP04085 AC009597.2-201ENST00000604659 592 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFAP04085 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFAP04085 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 MTND4LP32-201ENST00000636111 270 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 U6.114-201ENST00000636407 96 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFAP04085 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFAP04085 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFAP04085 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFAP04085 AC011369.2-201ENST00000624423 1567 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFAP04085 AC024651.2-201ENST00000562480 2098 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFAP04085 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFAP04085 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFAP04085 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.84□□□□□ -1.47
PDGFAP04085 RNA5SP273-201ENST00000362484 113 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 RNA5SP346-201ENST00000363541 121 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 RNVU1-3-201ENST00000364313 161 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 Y_RNA.445-201ENST00000384168 102 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 RNA5SP284-201ENST00000384547 118 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFAP04085 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFAP04085 AC068533.1-201ENST00000418542 415 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.84□□□□□ -1.47
PDGFAP04085 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFAP04085 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 AL359265.2-201ENST00000434367 631 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AC010733.1-201ENST00000451515 401 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PDGFAP04085 NXT1P1-201ENST00000458481 316 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 RNU7-180P-201ENST00000459240 63 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFAP04085 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFAP04085 SIAH1P1-201ENST00000479411 923 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AC012123.2-201ENST00000485809 248 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 HMGB1P21-201ENST00000502313 581 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 RNU6-798P-201ENST00000516912 103 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 Y_RNA.711-201ENST00000516993 102 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFAP04085 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFAP04085 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFAP04085 NPIPB1P-202ENST00000588786 828 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AC006116.10-201ENST00000591836 581 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AC068768.2-201ENST00000602352 343 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 APOOP1-201ENST00000604695 592 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AL592436.1-201ENST00000605135 558 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AL080274.1-201ENST00000605565 220 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFAP04085 AL512652.1-201ENST00000619006 500 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 MRPL57P1-201ENST00000621486 265 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFAP04085 AC120057.5-201ENST00000623840 154 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFAP04085 AC244517.1-201ENST00000606030 2086 ntBASIC5.84□□□□□ -1.47
PDGFAP04085 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.84□□□□□ -1.48
PDGFAP04085 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.84□□□□□ -1.48
PDGFAP04085 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PDGFAP04085 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFAP04085 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.84□□□□□ -1.48
PDGFAP04085 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
PDGFAP04085 AC012618.3-205ENST00000637896 1496 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 AL359976.1-201ENST00000418655 3528 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms