Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.91□□□□□ -1.94
SPTA1P02549 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 AC004552.1-201ENST00000419089 348 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 ELOCP18-201ENST00000434209 337 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 RPS4XP13-201ENST00000483219 789 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.91□□□□□ -1.94
SPTA1P02549 TCP11X3P-202ENST00000514289 1254 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AL732372.2-225ENST00000642124 456 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.91□□□□□ -1.94
SPTA1P02549 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
SPTA1P02549 AC058791.1-201ENST00000608412 3198 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
SPTA1P02549 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.91□□□□□ -1.94
SPTA1P02549 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 EEF1A1P41-201ENST00000414667 207 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AC063976.3-201ENST00000426849 329 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AL513328.1-201ENST00000446460 224 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.91□□□□□ -1.94
SPTA1P02549 AC078785.3-201ENST00000476607 425 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 RPL21P6-201ENST00000479171 504 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AC108210.2-201ENST00000503681 201 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.91□□□□□ -1.94
SPTA1P02549 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.91□□□□□ -1.94
SPTA1P02549 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.91□□□□□ -1.94
SPTA1P02549 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.91□□□□□ -1.94
SPTA1P02549 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.91□□□□□ -1.94
SPTA1P02549 AC138761.3-201ENST00000579993 334 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 UBL5P2-201ENST00000583788 219 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.91□□□□□ -1.94
SPTA1P02549 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SPTA1P02549 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.91□□□□□ -1.94
SPTA1P02549 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.91□□□□□ -1.94
SPTA1P02549 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
SPTA1P02549 USP8P1-201ENST00000494673 3183 ntBASIC2.91□□□□□ -1.94
SPTA1P02549 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SPTA1P02549 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
SPTA1P02549 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.9□□□□□ -1.94
SPTA1P02549 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
SPTA1P02549 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SPTA1P02549 MIR489-201ENST00000384923 84 ntBASIC2.9□□□□□ -1.94
SPTA1P02549 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.9□□□□□ -1.94
SPTA1P02549 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.9□□□□□ -1.94
SPTA1P02549 AC114967.1-201ENST00000504890 259 ntBASIC2.9□□□□□ -1.94
SPTA1P02549 ANXA2P1-201ENST00000505539 926 ntBASIC2.9□□□□□ -1.94
SPTA1P02549 AC110794.1-201ENST00000505816 425 ntBASIC2.9□□□□□ -1.94
SPTA1P02549 AC026782.2-201ENST00000510845 636 ntBASIC2.9□□□□□ -1.94
SPTA1P02549 IGKV3-31-201ENST00000523109 329 ntBASIC2.9□□□□□ -1.94
SPTA1P02549 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.9□□□□□ -1.94
SPTA1P02549 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.9□□□□□ -1.94
SPTA1P02549 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.9□□□□□ -1.94
SPTA1P02549 AC079089.3-201ENST00000603094 673 ntBASIC2.9□□□□□ -1.94
SPTA1P02549 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SPTA1P02549 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SPTA1P02549 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SPTA1P02549 AC090971.4-201ENST00000560291 1800 ntBASIC2.9□□□□□ -1.95
SPTA1P02549 OR51C1P-202ENST00000641159 1444 ntBASIC2.9□□□□□ -1.95
SPTA1P02549 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SPTA1P02549 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SPTA1P02549 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SPTA1P02549 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.9□□□□□ -1.95
SPTA1P02549 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.9□□□□□ -1.95
SPTA1P02549 AC092809.1-201ENST00000441469 474 ntBASIC2.9□□□□□ -1.95
SPTA1P02549 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.9□□□□□ -1.95
SPTA1P02549 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC2.9□□□□□ -1.95
SPTA1P02549 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.9□□□□□ -1.95
SPTA1P02549 OR7A8P-201ENST00000595427 913 ntBASIC2.9□□□□□ -1.95
SPTA1P02549 AC098826.3-201ENST00000603823 466 ntBASIC2.9□□□□□ -1.95
SPTA1P02549 GMCL1P2-201ENST00000605230 823 ntBASIC2.9□□□□□ -1.95
SPTA1P02549 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.9□□□□□ -1.95
SPTA1P02549 MTCO1P8-201ENST00000416914 1523 ntBASIC2.9□□□□□ -1.95
SPTA1P02549 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SPTA1P02549 AL049780.3-201ENST00000624612 1583 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SPTA1P02549 AC062016.1-201ENST00000355719 319 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 RNU1-70P-201ENST00000362618 164 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 Y_RNA.269-201ENST00000364685 89 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 AL353692.2-201ENST00000407054 335 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 AC019097.1-201ENST00000424783 735 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SPTA1P02549 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.89□□□□□ -1.95
SPTA1P02549 WASF1P1-201ENST00000447560 1131 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 RPS3AP50-201ENST00000487064 803 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 RNU6-548P-201ENST00000517083 115 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.89□□□□□ -1.95
SPTA1P02549 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.89□□□□□ -1.95
SPTA1P02549 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.89□□□□□ -1.95
SPTA1P02549 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.89□□□□□ -1.95
SPTA1P02549 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.89□□□□□ -1.95
SPTA1P02549 AC024153.1-201ENST00000603103 365 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms