Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC234772.1-201ENST00000377927 937 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 RNU6-891P-201ENST00000384280 111 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 MIR449B-201ENST00000384995 97 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AL357075.1-201ENST00000404107 726 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AL034374.1-201ENST00000406329 351 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 RNA5SP44-201ENST00000410446 133 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC073069.1-201ENST00000428657 441 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 Z85994.2-201ENST00000434327 452 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 CACYBPP1-201ENST00000438592 684 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 RPL23AP14-201ENST00000468281 468 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 SNORA48.9-201ENST00000516419 162 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC006518.1-201ENST00000541449 943 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 HIGD1AP1-201ENST00000550979 275 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC020658.4-201ENST00000613987 684 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 MIR7975-201ENST00000619350 68 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC015967.1-201ENST00000619893 476 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AC091903.1-201ENST00000624322 454 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 CFTRP2-201ENST00000634304 199 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 MTND5P24-201ENST00000438892 1767 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTDNEP1O95476 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 RNU6-304P-201ENST00000364855 107 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTDNEP1O95476 MTCYBP7-201ENST00000419540 1134 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 RPL7P53-201ENST00000421245 739 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 MTCO3P21-201ENST00000430791 643 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 XKRYP6-201ENST00000440468 1116 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 XKRYP3-201ENST00000442113 1116 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 MTCYBP21-201ENST00000443300 1113 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 PRDX3P3-201ENST00000447765 522 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 RPL21P10-201ENST00000463521 490 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 AP002812.1-201ENST00000495378 474 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 UBE2NP1-201ENST00000545592 458 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 CCDC58P3-201ENST00000590792 430 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 FAM60CP-201ENST00000591086 664 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 CKS1BP3-201ENST00000600888 237 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 AC073657.2-201ENST00000605661 303 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTDNEP1O95476 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 ELL2P4-201ENST00000446870 1376 ntBASIC3.73□□□□□ -1.81
CTDNEP1O95476 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CTDNEP1O95476 MTCO1P14-201ENST00000441695 1559 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTDNEP1O95476 MTCO1P12-201ENST00000414273 1543 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 RNU6-670P-201ENST00000364312 104 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC245291.1-201ENST00000419501 328 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 OR1AA1P-201ENST00000419597 916 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AL353705.1-201ENST00000433468 480 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC093716.1-201ENST00000435923 377 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 RPL6P5-201ENST00000445678 828 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 CYCSP35-201ENST00000451978 304 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 SNRPGP5-201ENST00000456003 220 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 RNU6-1218P-201ENST00000458990 108 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC073522.1-201ENST00000483312 377 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 RNU6-319P-201ENST00000516025 108 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 NCAPGP2-201ENST00000557911 754 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC243654.2-201ENST00000612843 443 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC016911.1-201ENST00000613297 452 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC105227.2-201ENST00000615075 605 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 AC145207.9-201ENST00000623802 325 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 AL133383.2-201ENST00000622958 2336 ntBASIC3.72□□□□□ -1.81
CTDNEP1O95476 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.72□□□□□ -1.81
CTDNEP1O95476 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTDNEP1O95476 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CTDNEP1O95476 AC107081.3-201ENST00000612715 2034 ntBASIC3.71□□□□□ -1.81
CTDNEP1O95476 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms