Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC078785.3-201ENST00000476607 425 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.54□□□□□ -1.84
SHOX2O60902 AC023632.4-201ENST00000517783 191 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AC107934.2-201ENST00000518653 310 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AC022695.1-201ENST00000522089 237 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.54□□□□□ -1.84
SHOX2O60902 MTND5P21-201ENST00000531961 522 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.54□□□□□ -1.84
SHOX2O60902 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.54□□□□□ -1.84
SHOX2O60902 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.54□□□□□ -1.84
SHOX2O60902 RN7SL339P-201ENST00000580597 296 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 NF1P5-201ENST00000588287 448 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AL365400.2-201ENST00000605604 902 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AC011472.4-201ENST00000615848 491 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 C2orf27A-204ENST00000623058 969 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AL356863.1-201ENST00000623378 1080 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AC004943.3-201ENST00000624116 600 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 CASC19-261ENST00000641853 1638 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
SHOX2O60902 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOX2O60902 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.54□□□□□ -1.84
SHOX2O60902 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.54□□□□□ -1.84
SHOX2O60902 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.54□□□□□ -1.84
SHOX2O60902 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHOX2O60902 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHOX2O60902 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SHOX2O60902 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHOX2O60902 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHOX2O60902 SNORA71.3-201ENST00000362582 128 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 RNU6-670P-201ENST00000364312 104 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 SNORA70E-201ENST00000384492 135 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHOX2O60902 PTMAP2-201ENST00000397627 327 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
SHOX2O60902 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.53□□□□□ -1.84
SHOX2O60902 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.53□□□□□ -1.84
SHOX2O60902 RPL23AP69-201ENST00000431134 458 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 AC007563.3-201ENST00000433233 371 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.53□□□□□ -1.84
SHOX2O60902 HMGB3P11-201ENST00000440127 604 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHOX2O60902 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.53□□□□□ -1.84
SHOX2O60902 AC114755.5-201ENST00000447760 831 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 RPL21P18-201ENST00000469899 480 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.53□□□□□ -1.84
SHOX2O60902 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.53□□□□□ -1.84
SHOX2O60902 AC067904.2-201ENST00000517322 1283 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.53□□□□□ -1.84
SHOX2O60902 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.53□□□□□ -1.84
SHOX2O60902 AC067852.4-201ENST00000590314 478 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.53□□□□□ -1.84
SHOX2O60902 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.53□□□□□ -1.84
SHOX2O60902 MIR8058-201ENST00000615737 89 ntBASIC3.53□□□□□ -1.84
SHOX2O60902 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.53□□□□□ -1.84
SHOX2O60902 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
SHOX2O60902 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.52□□□□□ -1.85
SHOX2O60902 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 XPOTP1-201ENST00000443317 2398 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
SHOX2O60902 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHOX2O60902 NDUFB4P4-201ENST00000404822 243 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.52□□□□□ -1.85
SHOX2O60902 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHOX2O60902 RPS24P8-201ENST00000431490 402 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 UBDP1-202ENST00000457888 382 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 RN7SL75P-201ENST00000461926 281 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 RN7SL542P-201ENST00000467147 294 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 AC110792.1-201ENST00000491826 472 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.52□□□□□ -1.85
SHOX2O60902 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.52□□□□□ -1.85
SHOX2O60902 MRPL49P2-201ENST00000521066 465 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 IGKV2D-19-201ENST00000523346 262 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.52□□□□□ -1.85
SHOX2O60902 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.52□□□□□ -1.85
SHOX2O60902 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.52□□□□□ -1.85
SHOX2O60902 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.52□□□□□ -1.85
SHOX2O60902 AC022916.3-201ENST00000592961 742 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 AC005255.1-201ENST00000593748 216 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.52□□□□□ -1.85
SHOX2O60902 MIR6867-201ENST00000610636 67 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 AL354976.1-201ENST00000613843 387 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 AC005183.1-201ENST00000603687 1979 ntBASIC3.52□□□□□ -1.85
SHOX2O60902 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHOX2O60902 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOX2O60902 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 AC107081.3-201ENST00000612715 2034 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 MTND5P19-201ENST00000424872 1794 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms