Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC109315.1-201ENST00000584143 1347 ntBASIC3.95□□□□□ -1.78
PRKNO60260 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.94□□□□□ -1.78
PRKNO60260 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PRKNO60260 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 SGO1P2-201ENST00000429458 1589 ntBASIC3.94□□□□□ -1.78
PRKNO60260 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKNO60260 RNU6-839P-201ENST00000363347 108 ntBASIC3.94□□□□□ -1.78
PRKNO60260 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 AC019155.1-201ENST00000382242 574 ntBASIC3.94□□□□□ -1.78
PRKNO60260 MIR217-201ENST00000384817 110 ntBASIC3.94□□□□□ -1.78
PRKNO60260 MIR1302-8-201ENST00000408342 128 ntBASIC3.94□□□□□ -1.78
PRKNO60260 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 RNU6-603P-201ENST00000411403 107 ntBASIC3.94□□□□□ -1.78
PRKNO60260 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKNO60260 AC073136.2-201ENST00000417282 849 ntBASIC3.94□□□□□ -1.78
PRKNO60260 TRGV6-201ENST00000417928 299 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RPL23AP38-201ENST00000423801 469 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RPL7P44-201ENST00000424827 742 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AL593851.1-201ENST00000426171 157 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC234781.2-201ENST00000426370 994 ntBASIC3.94□□□□□ -1.78
PRKNO60260 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.94□□□□□ -1.78
PRKNO60260 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC004975.1-201ENST00000428733 208 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.94□□□□□ -1.78
PRKNO60260 RPL12P46-201ENST00000436610 195 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.94□□□□□ -1.78
PRKNO60260 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKNO60260 RPL21P133-201ENST00000443666 476 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RPL7P59-201ENST00000447700 943 ntBASIC3.94□□□□□ -1.78
PRKNO60260 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.94□□□□□ -1.78
PRKNO60260 NUTF2P7-201ENST00000453086 375 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RFC5P1-201ENST00000454419 874 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RPL23AP81-201ENST00000455252 467 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC079804.1-201ENST00000461922 436 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RN7SL41P-201ENST00000476144 297 ntBASIC3.94□□□□□ -1.78
PRKNO60260 GAPDHP36-201ENST00000480688 918 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC093267.1-201ENST00000489176 961 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC104164.2-201ENST00000496953 495 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.94□□□□□ -1.78
PRKNO60260 RPF2P2-201ENST00000504693 896 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC008494.2-201ENST00000514544 370 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RNA5SP73-201ENST00000516744 108 ntBASIC3.94□□□□□ -1.78
PRKNO60260 NPM1P6-201ENST00000521088 871 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.94□□□□□ -1.78
PRKNO60260 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 AC006064.5-201ENST00000541782 248 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKNO60260 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.94□□□□□ -1.78
PRKNO60260 AC079171.1-201ENST00000568788 914 ntBASIC3.94□□□□□ -1.78
PRKNO60260 RN7SL600P-201ENST00000581811 299 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC022069.1-201ENST00000582910 658 ntBASIC3.94□□□□□ -1.78
PRKNO60260 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKNO60260 AL358072.1-201ENST00000604156 575 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC131235.4-201ENST00000609288 620 ntBASIC3.94□□□□□ -1.78
PRKNO60260 FAM27D1-201ENST00000612308 341 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AL139418.1-201ENST00000613613 177 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AL512506.2-201ENST00000624472 458 ntBASIC3.94□□□□□ -1.78
PRKNO60260 AC116618.1-201ENST00000634617 774 ntBASIC3.94□□□□□ -1.78
PRKNO60260 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PRKNO60260 AC009951.1-201ENST00000623674 2614 ntBASIC3.94□□□□□ -1.78
PRKNO60260 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PRKNO60260 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKNO60260 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKNO60260 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKNO60260 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 OR52B1P-201ENST00000316506 909 ntBASIC3.93□□□□□ -1.78
PRKNO60260 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PRKNO60260 AL450992.3-201ENST00000413192 568 ntBASIC3.93□□□□□ -1.78
PRKNO60260 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AL358176.3-201ENST00000420757 454 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 AC012519.1-201ENST00000424588 610 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 Z93242.1-201ENST00000427102 353 ntBASIC3.93□□□□□ -1.78
PRKNO60260 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 COX6B1P7-201ENST00000430845 235 ntBASIC3.93□□□□□ -1.78
PRKNO60260 BTF3P10-201ENST00000433415 495 ntBASIC3.93□□□□□ -1.78
PRKNO60260 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.93□□□□□ -1.78
PRKNO60260 RPS20P1-201ENST00000434853 354 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKNO60260 AC092013.1-201ENST00000438795 332 ntBASIC3.93□□□□□ -1.78
PRKNO60260 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 MTCYBP34-201ENST00000439552 670 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKNO60260 AC004865.1-201ENST00000442276 1003 ntBASIC3.93□□□□□ -1.78
PRKNO60260 KATNBL1P3-201ENST00000443475 909 ntBASIC3.93□□□□□ -1.78
PRKNO60260 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.93□□□□□ -1.78
PRKNO60260 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKNO60260 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKNO60260 ABCF2P2-201ENST00000450549 296 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms