Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.93□□□□□ -1.78
MSH4O15457 RNU2-27P-201ENST00000516185 142 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.93□□□□□ -1.78
MSH4O15457 AC090819.1-201ENST00000523800 1111 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.93□□□□□ -1.78
MSH4O15457 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.93□□□□□ -1.78
MSH4O15457 DUXAP6-201ENST00000553858 601 ntBASIC3.93□□□□□ -1.78
MSH4O15457 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.93□□□□□ -1.78
MSH4O15457 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.93□□□□□ -1.78
MSH4O15457 LINC00557-201ENST00000563184 1279 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC020914.4-201ENST00000597690 277 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC024220.1-201ENST00000603675 484 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC069200.1-201ENST00000609511 323 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MSH4O15457 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 AP003072.4-201ENST00000624580 310 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC244205.2-202ENST00000635781 342 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AL353743.4-201ENST00000422653 1547 ntBASIC3.93□□□□□ -1.78
MSH4O15457 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
MSH4O15457 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MSH4O15457 MFSD8-233ENST00000641482 4860 ntBASIC3.92□□□□□ -1.78
MSH4O15457 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MSH4O15457 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
MSH4O15457 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MSH4O15457 MTCO1P12-201ENST00000414273 1543 ntBASIC3.92□□□□□ -1.78
MSH4O15457 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.92□□□□□ -1.78
MSH4O15457 AL645937.1-201ENST00000641739 1652 ntBASIC3.92□□□□□ -1.78
MSH4O15457 OR6K3-202ENST00000368146 996 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
MSH4O15457 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.92□□□□□ -1.78
MSH4O15457 MORF4L1P7-201ENST00000426038 703 ntBASIC3.92□□□□□ -1.78
MSH4O15457 PTP4A1P3-201ENST00000433661 420 ntBASIC3.92□□□□□ -1.78
MSH4O15457 TPTE2P6-202ENST00000445572 1007 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC008155.2-201ENST00000464337 397 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC011037.1-201ENST00000483964 558 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.92□□□□□ -1.78
MSH4O15457 VTA1P2-201ENST00000520205 911 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.92□□□□□ -1.78
MSH4O15457 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MSH4O15457 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.92□□□□□ -1.78
MSH4O15457 AC025260.1-201ENST00000548858 430 ntBASIC3.92□□□□□ -1.78
MSH4O15457 POLR2KP1-201ENST00000553226 168 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.92□□□□□ -1.78
MSH4O15457 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.92□□□□□ -1.78
MSH4O15457 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.92□□□□□ -1.78
MSH4O15457 AP003117.1-201ENST00000602771 554 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AL139286.1-201ENST00000604465 483 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC018618.2-201ENST00000604770 446 ntBASIC3.92□□□□□ -1.78
MSH4O15457 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.92□□□□□ -1.78
MSH4O15457 AC017076.1-201ENST00000607613 578 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC019176.2-201ENST00000611579 315 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC244100.1-202ENST00000621554 382 ntBASIC3.92□□□□□ -1.78
MSH4O15457 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.92□□□□□ -1.78
MSH4O15457 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
MSH4O15457 Z73965.1-201ENST00000623412 2297 ntBASIC3.92□□□□□ -1.78
MSH4O15457 AC007390.2-201ENST00000606229 3803 ntBASIC3.92□□□□□ -1.78
MSH4O15457 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.92□□□□□ -1.78
MSH4O15457 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
MSH4O15457 NMD3P1-201ENST00000439704 1488 ntBASIC3.92□□□□□ -1.78
MSH4O15457 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MSH4O15457 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
MSH4O15457 PRO1804-201ENST00000623780 2050 ntBASIC3.91□□□□□ -1.78
MSH4O15457 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.91□□□□□ -1.78
MSH4O15457 CEP170P1-201ENST00000502249 4587 ntBASIC3.91□□□□□ -1.78
MSH4O15457 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MSH4O15457 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MSH4O15457 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MSH4O15457 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MSH4O15457 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MSH4O15457 MIR7-3-201ENST00000384898 110 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AL603766.1-201ENST00000407763 664 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.91□□□□□ -1.78
MSH4O15457 HMGB3P21-201ENST00000452483 547 ntBASIC3.91□□□□□ -1.78
MSH4O15457 MTCO3P16-201ENST00000454456 754 ntBASIC3.91□□□□□ -1.78
MSH4O15457 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.91□□□□□ -1.78
MSH4O15457 IGKV2-26-201ENST00000518305 343 ntBASIC3.91□□□□□ -1.78
MSH4O15457 IGKV2-36-201ENST00000519999 223 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.91□□□□□ -1.78
MSH4O15457 CIR1P1-201ENST00000524055 1133 ntBASIC3.91□□□□□ -1.78
MSH4O15457 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
MSH4O15457 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.91□□□□□ -1.78
MSH4O15457 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
MSH4O15457 AC025918.2-201ENST00000558683 763 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC106785.3-201ENST00000564064 847 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.91□□□□□ -1.78
MSH4O15457 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MSH4O15457 MTND4LP24-201ENST00000572277 291 ntBASIC3.91□□□□□ -1.78
MSH4O15457 MIR4738-201ENST00000579134 87 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.91□□□□□ -1.78
MSH4O15457 NF1P5-201ENST00000588287 448 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC006946.3-201ENST00000609791 756 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC078899.5-201ENST00000612475 178 ntBASIC3.91□□□□□ -1.78
MSH4O15457 MIR7975-201ENST00000619350 68 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC012314.7-201ENST00000619693 93 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC022149.2-201ENST00000621061 203 ntBASIC3.91□□□□□ -1.78
MSH4O15457 AC091948.2-201ENST00000636510 279 ntBASIC3.91□□□□□ -1.78
MSH4O15457 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms