Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC006480.1-201ENST00000449887 378 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 BX276092.4-201ENST00000452056 248 ntBASIC3.62□□□□□ -1.83
LSM1O15116 NANOGP10-201ENST00000453325 895 ntBASIC3.62□□□□□ -1.83
LSM1O15116 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.62□□□□□ -1.83
LSM1O15116 OR9N1P-202ENST00000494289 481 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.62□□□□□ -1.83
LSM1O15116 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 TXNP6-201ENST00000510190 310 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 AC139103.1-201ENST00000534696 1030 ntBASIC3.62□□□□□ -1.83
LSM1O15116 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.62□□□□□ -1.83
LSM1O15116 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 AC015726.1-201ENST00000602353 681 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC011468.4-201ENST00000603942 409 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AL365400.2-201ENST00000605604 902 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.62□□□□□ -1.83
LSM1O15116 MIR6500-201ENST00000622700 86 ntBASIC3.62□□□□□ -1.83
LSM1O15116 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.62□□□□□ -1.83
LSM1O15116 AC090337.1-201ENST00000579651 2074 ntBASIC3.62□□□□□ -1.83
LSM1O15116 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
LSM1O15116 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LSM1O15116 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LSM1O15116 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LSM1O15116 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LSM1O15116 MTCO1P24-201ENST00000515438 1558 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AL512646.1-201ENST00000269395 1077 ntBASIC3.61□□□□□ -1.83
LSM1O15116 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LSM1O15116 RNU6-543P-201ENST00000362576 108 ntBASIC3.61□□□□□ -1.83
LSM1O15116 SNORD115-48-201ENST00000364764 76 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AL391417.1-201ENST00000404100 426 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AL353692.2-201ENST00000407054 335 ntBASIC3.61□□□□□ -1.83
LSM1O15116 RNA5SP317-201ENST00000410176 116 ntBASIC3.61□□□□□ -1.83
LSM1O15116 RNA5SP311-201ENST00000411290 116 ntBASIC3.61□□□□□ -1.83
LSM1O15116 RPS15AP40-201ENST00000419621 391 ntBASIC3.61□□□□□ -1.83
LSM1O15116 MTND2P16-201ENST00000419987 799 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AC023128.2-201ENST00000420880 1223 ntBASIC3.61□□□□□ -1.83
LSM1O15116 MTND4LP14-201ENST00000429447 288 ntBASIC3.61□□□□□ -1.83
LSM1O15116 MTCO1P43-201ENST00000431831 488 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LSM1O15116 TRIM60P13-201ENST00000432350 1283 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.61□□□□□ -1.83
LSM1O15116 AC092685.1-201ENST00000447960 1243 ntBASIC3.61□□□□□ -1.83
LSM1O15116 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.61□□□□□ -1.83
LSM1O15116 SLC31A1P1-201ENST00000451221 567 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.61□□□□□ -1.83
LSM1O15116 RPS7P7-201ENST00000463499 571 ntBASIC3.61□□□□□ -1.83
LSM1O15116 RPL6P9-201ENST00000466502 859 ntBASIC3.61□□□□□ -1.83
LSM1O15116 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.61□□□□□ -1.83
LSM1O15116 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.61□□□□□ -1.83
LSM1O15116 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.61□□□□□ -1.83
LSM1O15116 RNA5SP315-201ENST00000516340 116 ntBASIC3.61□□□□□ -1.83
LSM1O15116 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
LSM1O15116 RNA5SP312-201ENST00000517068 116 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.61□□□□□ -1.83
LSM1O15116 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.61□□□□□ -1.83
LSM1O15116 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.61□□□□□ -1.83
LSM1O15116 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LSM1O15116 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.61□□□□□ -1.83
LSM1O15116 AC120057.2-201ENST00000571520 271 ntBASIC3.61□□□□□ -1.83
LSM1O15116 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.61□□□□□ -1.83
LSM1O15116 AC010928.3-201ENST00000587712 541 ntBASIC3.61□□□□□ -1.83
LSM1O15116 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.61□□□□□ -1.83
LSM1O15116 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.61□□□□□ -1.83
LSM1O15116 AL023583.1-201ENST00000607518 1143 ntBASIC3.61□□□□□ -1.83
LSM1O15116 OR2BH1P-201ENST00000608850 864 ntBASIC3.61□□□□□ -1.83
LSM1O15116 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.61□□□□□ -1.83
LSM1O15116 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.61□□□□□ -1.83
LSM1O15116 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.61□□□□□ -1.83
LSM1O15116 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LSM1O15116 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.61□□□□□ -1.83
LSM1O15116 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LSM1O15116 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.6□□□□□ -1.83
LSM1O15116 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 SNORA31-201ENST00000362607 130 ntBASIC3.6□□□□□ -1.83
LSM1O15116 SNORA70C-201ENST00000384538 135 ntBASIC3.6□□□□□ -1.83
LSM1O15116 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 PRRC2CP1-201ENST00000404428 159 ntBASIC3.6□□□□□ -1.83
LSM1O15116 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM1O15116 AC016712.1-201ENST00000431088 378 ntBASIC3.6□□□□□ -1.83
LSM1O15116 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
LSM1O15116 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM1O15116 CYCSP53-201ENST00000455540 265 ntBASIC3.6□□□□□ -1.83
LSM1O15116 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.6□□□□□ -1.83
LSM1O15116 CYCSP20-201ENST00000473154 315 ntBASIC3.6□□□□□ -1.83
LSM1O15116 NCOR1P1-202ENST00000486162 291 ntBASIC3.6□□□□□ -1.83
LSM1O15116 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.6□□□□□ -1.83
LSM1O15116 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms