Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.68□□□□□ -1.5
CUX2O14529 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CUX2O14529 AC008489.1-201ENST00000524271 483 ntBASIC5.68□□□□□ -1.5
CUX2O14529 HIGD1AP1-201ENST00000550979 275 ntBASIC5.68□□□□□ -1.5
CUX2O14529 AL732372.2-225ENST00000642124 456 ntBASIC5.68□□□□□ -1.5
CUX2O14529 LINC02471-203ENST00000641941 4752 ntBASIC5.68□□□□□ -1.5
CUX2O14529 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CUX2O14529 MTND4P26-201ENST00000415971 1359 ntBASIC5.67□□□□□ -1.5
CUX2O14529 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.67□□□□□ -1.5
CUX2O14529 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 AL672167.1-206ENST00000356293 943 ntBASIC5.67□□□□□ -1.5
CUX2O14529 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CUX2O14529 ATP5C1P1-201ENST00000441945 895 ntBASIC5.67□□□□□ -1.5
CUX2O14529 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.67□□□□□ -1.5
CUX2O14529 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.67□□□□□ -1.5
CUX2O14529 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.67□□□□□ -1.5
CUX2O14529 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.67□□□□□ -1.5
CUX2O14529 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.67□□□□□ -1.5
CUX2O14529 APOOP4-201ENST00000513530 597 ntBASIC5.67□□□□□ -1.5
CUX2O14529 EIF1P6-201ENST00000600054 334 ntBASIC5.67□□□□□ -1.5
CUX2O14529 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 AC092079.1-201ENST00000558620 1985 ntBASIC5.67□□□□□ -1.5
CUX2O14529 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUX2O14529 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.66□□□□□ -1.5
CUX2O14529 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CUX2O14529 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CUX2O14529 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CUX2O14529 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUX2O14529 HMGN2P8-201ENST00000391458 268 ntBASIC5.66□□□□□ -1.5
CUX2O14529 AC005189.1-201ENST00000431286 310 ntBASIC5.66□□□□□ -1.5
CUX2O14529 RPL23AP71-201ENST00000470966 469 ntBASIC5.66□□□□□ -1.5
CUX2O14529 AC069499.1-201ENST00000489433 509 ntBASIC5.66□□□□□ -1.5
CUX2O14529 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.66□□□□□ -1.5
CUX2O14529 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.66□□□□□ -1.5
CUX2O14529 VN1R90P-201ENST00000595717 726 ntBASIC5.66□□□□□ -1.5
CUX2O14529 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CUX2O14529 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUX2O14529 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUX2O14529 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CUX2O14529 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.66□□□□□ -1.5
CUX2O14529 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.66□□□□□ -1.5
CUX2O14529 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
CUX2O14529 MIR764-201ENST00000390811 85 ntBASIC5.65□□□□□ -1.5
CUX2O14529 AC007563.3-201ENST00000433233 371 ntBASIC5.65□□□□□ -1.5
CUX2O14529 BTG3P1-201ENST00000435859 716 ntBASIC5.65□□□□□ -1.5
CUX2O14529 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.65□□□□□ -1.5
CUX2O14529 AC022882.1-201ENST00000532142 501 ntBASIC5.65□□□□□ -1.5
CUX2O14529 AC009097.3-201ENST00000563557 1018 ntBASIC5.65□□□□□ -1.5
CUX2O14529 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.65□□□□□ -1.5
CUX2O14529 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.65□□□□□ -1.5
CUX2O14529 AC022960.2-201ENST00000616300 666 ntBASIC5.65□□□□□ -1.5
CUX2O14529 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.65□□□□□ -1.5
CUX2O14529 SAGE4P-201ENST00000442271 3381 ntBASIC5.65□□□□□ -1.51
CUX2O14529 AC027287.1-201ENST00000553115 1453 ntBASIC5.65□□□□□ -1.51
CUX2O14529 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.65□□□□□ -1.51
CUX2O14529 AL121578.1-201ENST00000428051 892 ntBASIC5.64□□□□□ -1.51
CUX2O14529 MTCO3P17-201ENST00000443775 513 ntBASIC5.64□□□□□ -1.51
CUX2O14529 SYT14P1-201ENST00000481459 721 ntBASIC5.64□□□□□ -1.51
CUX2O14529 AC112198.1-201ENST00000505369 1220 ntBASIC5.64□□□□□ -1.51
CUX2O14529 ASNSP4-201ENST00000511103 447 ntBASIC5.64□□□□□ -1.51
CUX2O14529 DEFB122-202ENST00000569013 197 ntBASIC5.64□□□□□ -1.51
CUX2O14529 ADAM3B-201ENST00000569937 840 ntBASIC5.64□□□□□ -1.51
CUX2O14529 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.64□□□□□ -1.51
CUX2O14529 AC087468.1-201ENST00000604365 630 ntBASIC5.64□□□□□ -1.51
CUX2O14529 AL354950.1-201ENST00000614150 568 ntBASIC5.64□□□□□ -1.51
CUX2O14529 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC5.64□□□□□ -1.51
CUX2O14529 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CUX2O14529 NMD3P1-201ENST00000439704 1488 ntBASIC5.64□□□□□ -1.51
CUX2O14529 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.64□□□□□ -1.51
CUX2O14529 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CUX2O14529 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.64□□□□□ -1.51
CUX2O14529 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
CUX2O14529 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CUX2O14529 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.64□□□□□ -1.51
CUX2O14529 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.64□□□□□ -1.51
CUX2O14529 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.64□□□□□ -1.51
CUX2O14529 AP002371.1-201ENST00000463604 433 ntBASIC5.64□□□□□ -1.51
CUX2O14529 SETP12-201ENST00000514068 805 ntBASIC5.64□□□□□ -1.51
CUX2O14529 RN7SKP5-201ENST00000517045 272 ntBASIC5.64□□□□□ -1.51
CUX2O14529 OR4R3P-201ENST00000525084 838 ntBASIC5.64□□□□□ -1.51
CUX2O14529 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CUX2O14529 AC005242.1-201ENST00000585658 438 ntBASIC5.64□□□□□ -1.51
CUX2O14529 AL512643.1-201ENST00000635735 524 ntBASIC5.64□□□□□ -1.51
CUX2O14529 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.64□□□□□ -1.51
CUX2O14529 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
CUX2O14529 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CUX2O14529 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
CUX2O14529 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CUX2O14529 AL049780.3-201ENST00000624612 1583 ntBASIC5.63□□□□□ -1.51
CUX2O14529 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.63□□□□□ -1.51
CUX2O14529 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CUX2O14529 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CUX2O14529 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.63□□□□□ -1.51
CUX2O14529 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.63□□□□□ -1.51
CUX2O14529 AC087190.4-201ENST00000574616 8334 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms