Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 HMGN1P5-201ENST00000448591 263 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.78□□□□□ -1.8
PDLIM1O00151 AC018635.1-201ENST00000468292 1030 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 RPS17P11-201ENST00000474297 293 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.78□□□□□ -1.8
PDLIM1O00151 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.78□□□□□ -1.8
PDLIM1O00151 AC110792.2-201ENST00000510278 224 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 RPL7L1P13-201ENST00000511702 739 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 MTCO3P27-201ENST00000514397 196 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 RNA5SP49-201ENST00000516450 115 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.78□□□□□ -1.8
PDLIM1O00151 IGHV3-76-201ENST00000522465 295 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.78□□□□□ -1.8
PDLIM1O00151 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.78□□□□□ -1.8
PDLIM1O00151 AL442163.2-201ENST00000553912 710 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 OR4H12P-201ENST00000556269 907 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC104072.1-201ENST00000568817 668 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC136624.4-201ENST00000573044 370 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC023575.1-201ENST00000580510 358 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC012417.1-201ENST00000582307 1039 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 KPNA2P3-201ENST00000584190 848 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM1O00151 LLPHP1-201ENST00000603571 367 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 MIR6716-201ENST00000613413 80 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC006338.2-201ENST00000616864 791 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM1O00151 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 AC093875.1-201ENST00000623688 504 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM1O00151 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PDLIM1O00151 AC046144.1-201ENST00000478559 1853 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM1O00151 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM1O00151 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM1O00151 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM1O00151 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 U6.112-201ENST00000384129 70 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 SNORA11C-201ENST00000408532 129 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AC241520.1-201ENST00000422654 1099 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 FO393414.1-201ENST00000428697 1184 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 TPT1P12-201ENST00000448968 492 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 MRPL35P4-201ENST00000453682 566 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM1O00151 GTF2IP12-201ENST00000456547 356 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 RPL36AP13-201ENST00000457490 317 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 SNORD108-201ENST00000459332 71 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AC010618.1-201ENST00000469924 477 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 UQCRHP4-201ENST00000471686 272 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AF213884.1-201ENST00000488102 463 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 RNA5SP380-201ENST00000517190 98 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AP003730.1-201ENST00000524605 285 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AC068339.2-201ENST00000534395 618 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM1O00151 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM1O00151 MIR4789-201ENST00000577469 82 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AL161729.3-201ENST00000603533 673 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AL451044.1-201ENST00000604867 238 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AP003117.2-201ENST00000606010 545 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 SNORA51-201ENST00000606420 132 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 AC243756.2-201ENST00000618406 463 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PDLIM1O00151 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.77□□□□□ -1.81
PDLIM1O00151 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.77□□□□□ -1.81
PDLIM1O00151 MIR6830-201ENST00000636015 70 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 OR52H1-202ENST00000641796 1061 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM1O00151 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM1O00151 AC073055.1-201ENST00000456901 1621 ntBASIC3.77□□□□□ -1.81
PDLIM1O00151 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM1O00151 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 GABPAP-201ENST00000419271 1356 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM1O00151 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 SNORA70.2-201ENST00000364506 135 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms