Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 ATP5C1P1-201ENST00000441945 895 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 RPL7P31-201ENST00000450192 724 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 SNRPGP5-201ENST00000456003 220 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 RN7SL75P-201ENST00000461926 281 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 RPL7P38-201ENST00000488396 739 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 APOOP4-201ENST00000513530 597 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC092868.3-201ENST00000560515 784 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 FAM106CP-201ENST00000582212 507 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 VN1R81P-201ENST00000602085 372 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AL020997.2-201ENST00000602607 184 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC090953.1-201ENST00000604305 1092 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC010200.2-201ENST00000605098 235 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AL109618.2-201ENST00000605527 211 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AL356274.1-201ENST00000617064 410 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
RNF11Q9Y3C5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 RNA5SP119-201ENST00000362715 117 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 RNU4-7P-201ENST00000364758 141 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 OR6K3-202ENST00000368146 996 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 RNA5SP44-201ENST00000410446 133 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC245052.5-201ENST00000416320 649 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 RPL23AP69-201ENST00000431134 458 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC122718.1-201ENST00000439448 744 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 FAM133DP-201ENST00000464802 691 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 RPL21P13-201ENST00000488305 481 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC021678.1-201ENST00000505195 936 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 SAP18P1-201ENST00000512058 390 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 MIR4716-201ENST00000579628 84 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 MIR4276-201ENST00000584832 70 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC099778.2-201ENST00000610904 211 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AC000123.2-201ENST00000623124 461 ntBASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF11Q9Y3C5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 RNU6-1331P-201ENST00000363658 106 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 PTMAP2-201ENST00000397627 327 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 RNA5SP229-201ENST00000410809 99 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 AC007899.1-201ENST00000412776 775 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 SDCBPP3-201ENST00000419629 891 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 Z99127.3-201ENST00000448158 395 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 RPL21P18-201ENST00000469899 480 ntBASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF11Q9Y3C5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms