Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 COPS8P2-201ENST00000473228 627 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RPL32P9-201ENST00000487963 407 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC023157.2-201ENST00000540596 141 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AL121594.2-201ENST00000541658 472 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC024614.2-201ENST00000577584 372 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC115621.1-201ENST00000604653 858 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC245389.1-201ENST00000605141 529 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC103710.4-201ENST00000609301 899 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 uc_338.15-201ENST00000615470 191 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC007485.1-201ENST00000616755 206 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC130304.1-201ENST00000622942 2385 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 NACAP2-201ENST00000318548 624 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 RNU5D-1-201ENST00000363299 116 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-370P-201ENST00000411008 104 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 SPA17P1-201ENST00000416656 452 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 YWHAEP5-201ENST00000431545 765 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 ATP5JP1-201ENST00000431631 322 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 PRPF38AP2-201ENST00000438179 851 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC098831.1-201ENST00000440661 216 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC005002.1-201ENST00000447458 540 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 ELOCP24-201ENST00000456370 334 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 RPS4XP10-201ENST00000465034 731 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 Y_RNA.721-201ENST00000517207 102 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC044860.2-201ENST00000561005 179 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 HMGN1P30-201ENST00000589286 268 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC011453.2-201ENST00000603737 729 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 IMMP1LP3-201ENST00000604197 224 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AL121612.2-201ENST00000612261 482 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC118658.2-201ENST00000618697 459 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC009318.4-201ENST00000620496 486 ntBASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
PDZRN3Q9UPQ7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PDZRN3Q9UPQ7 MTND5P19-201ENST00000424872 1794 ntBASIC7.46□□□□□ -1.21
PDZRN3Q9UPQ7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.46□□□□□ -1.21
PDZRN3Q9UPQ7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.46□□□□□ -1.21
PDZRN3Q9UPQ7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
PDZRN3Q9UPQ7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.46□□□□□ -1.21
PDZRN3Q9UPQ7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
PDZRN3Q9UPQ7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-200P-201ENST00000364743 107 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.364-201ENST00000365532 101 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-809P-201ENST00000384461 107 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 MIR1286-201ENST00000408112 78 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 MYL6P5-201ENST00000412707 459 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AL596448.1-201ENST00000415024 392 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 MTATP6P18-201ENST00000417994 673 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AC073335.1-201ENST00000427776 363 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 OR51AB1P-201ENST00000429046 620 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 RPL34P6-201ENST00000432390 345 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 KRT8P51-201ENST00000438938 274 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 GAPDHP39-201ENST00000481866 979 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 RPL7P38-201ENST00000488396 739 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 RNY4P37-201ENST00000516225 96 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AP006245.2-201ENST00000522004 300 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 POLR2KP1-201ENST00000553226 168 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AL390838.2-201ENST00000602394 274 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AC115286.1-201ENST00000604298 434 ntBASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.46□□□□□ -1.22
PDZRN3Q9UPQ7 AL512643.1-201ENST00000635735 524 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms